RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 IPPQ9Y573 584 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 RICTORQ6R327 1708 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 CCDC151A5D8V7 595 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 CASTOR2A6NHX0 329 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 CFAP99D6REC4 459 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 CSDE1O75534 798 aaKnown RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 GPD1P21695 349 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 IGFBP4P22692 258 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 LHX1P48742 406 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 BEX3Q00994 111 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 CUL2Q13617 745 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 IKBKEQ14164 716 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 PTK2BQ14289 1009 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 SYTL3Q4VX76 610 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 MEI1Q5TIA1 1274 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 CCDC137Q6PK04 289 aaKnown RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 CXCL17Q6UXB2 119 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 CBWD2Q8IUF1 395 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 DEPDC4Q8N2C3 294 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 CERS5Q8N5B7 392 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 PPHLN1Q8NEY8 458 aaKnown RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 C17orf50Q8WW18 174 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 DDX47Q9H0S4 455 aaKnown RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 KIAA1257Q9ULG3 409 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 ZDHHC9Q9Y397 364 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 SSU72P8A0A1W2PR75 194 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 GSTA4O15217 222 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 PSMD3O43242 534 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 POMCP01189 267 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 MLLT3P42568 568 aaPredicted RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 GALCP54803 685 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 SESN2P58004 480 aaPredicted RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 ZNF177Q13360 481 aaPredicted RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 LAMB3Q13751 1172 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 NIPA1Q7RTP0 329 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 ITIH5Q86UX2 942 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 C1orf54Q8WWF1 131 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 ANAPC16Q96DE5 110 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 FOPNLQ96NB1 174 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 TSSK1BQ9BXA7 367 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 CYP4F11Q9HBI6 524 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 PCDH12Q9NPG4 1184 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 GEMIN8Q9NWZ8 242 aaKnown RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 EPS15L1Q9UBC2 864 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 TSR3Q9UJK0 312 aaKnown RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 RALBP11234 206 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 TAL1P17542 331 aaPredicted RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 EPHB2P29323 1055 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 IFNA8P32881 189 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 COPS2P61201 443 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 PDIA2Q13087 525 aaKnown RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 MAP2K5Q13163 448 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 FBXO47Q5MNV8 452 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 ACOT1Q86TX2 421 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 ATP11CQ8NB49 1132 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 PPP1R14AQ96A00 147 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 TTC17Q96AE7 1141 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 RNPC3Q96LT9 517 aaKnown RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 APBA2Q99767 749 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 TMEM117Q9H0C3 514 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 CNOT10Q9H9A5 744 aaKnown RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 AIPL1Q9NZN9 384 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 ZFATQ9P243 1243 aa7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 PACSIN2Q9UNF0 486 aaPredicted RBP7.22□□□□□ -1.25
SRGAP1-206ENST00000543397 GNGT2O14610 69 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 NBNO60934 754 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 B3GALNT1O75752 331 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 KLRC2P26717 231 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 ARSEP51690 589 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 TMPRSS15P98073 1019 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 PDK1Q15118 436 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 CRY2Q49AN0 593 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 TBC1D19Q8N5T2 526 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 CCNYL1Q8N7R7 359 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 PPP1R2P1Q96PQ5 205 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 OSBPL9Q96SU4 736 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 NOVA2Q9UNW9 492 aaKnown RBP7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 TRPV2Q9Y5S1 764 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 ADGRG1Q9Y653 693 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 ARHGEF28Q8N1W1 1705 aaKnown RBP7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 KIF20BQ96Q89 1820 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 HIST1H2AGP0C0S8 130 aaPredicted RBP7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 HIST1H2ADP20671 130 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 GYS2P54840 703 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 MRPS25P82663 173 aaKnown RBP7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 IL1RL1Q01638 556 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 FMR1Q06787 632 aaKnown RBP eCLIP7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 TTC31Q49AM3 519 aaPredicted RBP7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 ALKBH2Q6NS38 261 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 SLC27A1Q6PCB7 646 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 ZBED8Q8IZ13 594 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 TMEM199Q8N511 208 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 HIST1H2AHQ96KK5 128 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 HIST1H2AJQ99878 128 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 H2AFJQ9BTM1 129 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 WDR18Q9BV38 432 aa7.21□□□□□ -1.25
SRGAP1-206ENST00000543397 CFAP69A5D8W1 941 aa7.21□□□□□ -1.26
SRGAP1-206ENST00000543397 RASA4BC9J798 803 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms