RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CD300LDQ6UXZ3 194 aa4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 RPTNQ6XPR3 784 aa4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 NEK10Q6ZWH5 1172 aa4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 TRMT2AQ8IZ69 625 aaKnown RBP4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 BCL6BQ8N143 479 aaPredicted RBP4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 DCBLD1Q8N8Z6 715 aa4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 FBXO18Q8NFZ0 1043 aa4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 OR56A3Q8NH54 315 aa4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 ADAMTS18Q8TE60 1221 aa4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 AFG1LQ8WV93 481 aa4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 THAP4Q8WY91 577 aa4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 SHISA4Q96DD7 197 aa4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 RRP36Q96EU6 259 aaKnown RBP4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 TMEM209Q96SK2 561 aa4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 KRTAP9-3Q9BYQ3 159 aa4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 PRKRIP1Q9H875 184 aaPredicted RBP4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 MLXIPQ9HAP2 919 aa4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 SEPSECSQ9HD40 501 aaKnown RBP4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 HEYLQ9NQ87 328 aaPredicted RBP4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 ZFP69BQ9UJL9 534 aa4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 JAG2Q9Y219 1238 aa4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 RUVBL1Q9Y265 456 aaKnown RBP4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 ACTL7AQ9Y615 435 aa4.49□□□□□ -1.69
SFSWAP-211ENST00000542813 A0A087WZ62 844 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 A0A087X0M5 115 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 A0A0G2JNJ9 132 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 CCDC196A0A1B0GTZ2 297 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 A0A1B0GX30 115 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 A0A1W2PRQ8 180 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 TMEM233B4DJY2 109 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 FCHO1O14526 889 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 ZBED4O75132 1171 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 ITGA10O75578 1167 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 RASSF9O75901 435 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 ACTL6BO94805 426 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 GASTP01350 101 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 A1BGP04217 495 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 MPOP05164 745 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 JUPP14923 745 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 MCCP23508 829 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 IL1R2P27930 398 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 PHKA1P46020 1223 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 MAPKAPK2P49137 400 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 TERF1P54274 439 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 PRKAA2P54646 552 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 VAMP2P63027 116 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 NOMO3P69849 1222 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 UBE3AQ05086 875 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 KIF22Q14807 665 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 RAB3GAP1Q15042 981 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 CCNG2Q16589 344 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 ALDH1L2Q3SY69 923 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 PLEKHN1Q494U1 663 aaPredicted RBP4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 PHF19Q5T6S3 580 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 DCAF12L1Q5VU92 463 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 USP17L6PQ6QN14 398 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 USP49Q70CQ1 688 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 ZNF605Q86T29 641 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 PLXDC1Q8IUK5 500 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 CCDC117Q8IWD4 279 aaPredicted RBP4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 YAF2Q8IY57 180 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 TCP11L2Q8N4U5 519 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 SLC15A4Q8N697 577 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 LILRA3Q8N6C8 439 aaPredicted RBP4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 DNAJC5GQ8N7S2 189 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 STPG3Q8N7X2 389 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 TSPYL6Q8N831 410 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 REPS2Q8NFH8 660 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 STON2Q8WXE9 905 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 ALG3Q92685 438 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 NKD2Q969F2 451 aaPredicted RBP4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 INTS4Q96HW7 963 aaKnown RBP4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 RSRC1Q96IZ7 334 aaKnown RBP4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 C20orf173Q96LM9 149 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 NELL2Q99435 816 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 TREX2Q9BQ50 279 aaPredicted RBP4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 LSM14BQ9BX40 385 aaKnown RBP4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 C11orf54Q9H0W9 315 aaPredicted RBP4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 PREBQ9HCU5 417 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 PARD6AQ9NPB6 346 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 Q9UFV3 132 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 MID2Q9UJV3 735 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 YBX2Q9Y2T7 364 aaKnown RBP4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 MTO1Q9Y2Z2 717 aaKnown RBP4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 HS3ST4Q9Y661 456 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 GRIN2AQ12879 1464 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 FGD5Q6ZNL6 1462 aa4.48□□□□□ -1.69
SFSWAP-211ENST00000542813 NUP160Q12769 1436 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 A0A087WWL8 130 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 TEX51A0A1B0GUA7 166 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 MYOCOSA0A1B0GUC4 107 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 GRM6O15303 877 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 TEX33O43247 280 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 DAPK3O43293 454 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 TIPRLO75663 272 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 ALDH1A2O94788 518 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 UNC5CO95185 931 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 GNAI2P04899 355 aa4.47□□□□□ -1.69
SFSWAP-211ENST00000542813 IL2RBP14784 551 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms