RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 WDR49Q8IV35 697 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 PDIK1LQ8N165 341 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 KCTD17Q8N5Z5 321 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 FAM71DQ8N9W8 422 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 MCUQ8NE86 351 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 SPATA18Q8TC71 538 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 TMEM176AQ96HP8 235 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 ZNF512Q96ME7 567 aaPredicted RBP10.68□□□□□ -0.7
TOP3A-208ENST00000542570 MTG1Q9BT17 334 aaPredicted RBP10.68□□□□□ -0.7
TOP3A-208ENST00000542570 HMX1Q9NP08 348 aaPredicted RBP10.68□□□□□ -0.7
TOP3A-208ENST00000542570 UVRAGQ9P2Y5 699 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 CPSF3Q9UKF6 684 aaKnown RBP10.68□□□□□ -0.7
TOP3A-208ENST00000542570 SLC15A5A6NIM6 579 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 M0QYT0 321 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 CLDN5O00501 218 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 INHBAP08476 426 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 MAGOHP61326 146 aaKnown RBP10.68□□□□□ -0.7
TOP3A-208ENST00000542570 TRADDQ15628 312 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 P3H1Q32P28 736 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 DENND1BQ6P3S1 775 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 TRIM72Q6ZMU5 477 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 SHCBP1Q8NEM2 672 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 GPR152Q8TDT2 470 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 SYN2Q92777 582 aaPredicted RBP10.68□□□□□ -0.7
TOP3A-208ENST00000542570 DDIT4Q9NX09 232 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 ADAM21Q9UKJ8 722 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 G3BP2Q9UN86 482 aaKnown RBP10.68□□□□□ -0.7
TOP3A-208ENST00000542570 ST3GAL5Q9UNP4 418 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 C10orf71Q711Q0 1435 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 CD4P01730 458 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 C15orf59Q2T9L4 293 aaPredicted RBP10.68□□□□□ -0.7
TOP3A-208ENST00000542570 WSCD1Q658N2 575 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 ZPBP2Q6X784 338 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 CCDC121Q6ZUS5 278 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 ADGRF2Q8IZF7 708 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 ABRAQ8N0Z2 381 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 RXFP2Q8WXD0 754 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 ERLEC1Q96DZ1 483 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 C12orf42Q96LP6 360 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 RAB6BQ9NRW1 208 aa10.68□□□□□ -0.7
TOP3A-208ENST00000542570 DDX43Q9NXZ2 648 aaKnown RBP10.68□□□□□ -0.7
TOP3A-208ENST00000542570 COL4A1P02462 1669 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 ASGR1P07306 291 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 MEA1Q16626 185 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 ZSCAN26Q16670 478 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 CCDC14Q49A88 953 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 CCNI2Q6ZMN8 369 aaPredicted RBP10.67□□□□□ -0.7
TOP3A-208ENST00000542570 TMEM121Q9BTD3 319 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 DHX33Q9H6R0 707 aaKnown RBP10.67□□□□□ -0.7
TOP3A-208ENST00000542570 L2HGDHQ9H9P8 463 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 INTS9Q9NV88 658 aaKnown RBP10.67□□□□□ -0.7
TOP3A-208ENST00000542570 STAP1Q9ULZ2 295 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 FIS1Q9Y3D6 152 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 CASZ1Q86V15 1759 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 IGF2BP3O00425 579 aaKnown RBP eCLIP10.67□□□□□ -0.7
TOP3A-208ENST00000542570 MMP3P08254 477 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 KRT7P08729 469 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 GJA5P36382 358 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 DEUP1Q05D60 604 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 FAM47EQ6ZV65 393 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 JAMLQ86YT9 394 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 PPM1NQ8N819 430 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 PCDHB18PQ96TA0 734 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 B3GNT5Q9BYG0 378 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 ZNF112Q9UJU3 913 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 NFASCO94856 1347 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 LAMB4A4D0S4 1761 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 A0A0B4J269 797 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 E5RJQ4 531 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 NOGQ13253 232 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 ARL13BQ3SXY8 428 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 ZACNQ401N2 412 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 ILDR2Q71H61 639 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 PDZD4Q76G19 769 aaPredicted RBP10.67□□□□□ -0.7
TOP3A-208ENST00000542570 MCOLN2Q8IZK6 566 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 SMC1BQ8NDV3 1235 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 MBOAT7Q96N66 472 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 APOL2Q9BQE5 337 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 TMEM106CQ9BVX2 250 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 ABCF3Q9NUQ8 709 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 TUBGCP4Q9UGJ1 667 aa10.67□□□□□ -0.7
TOP3A-208ENST00000542570 GPR182O15218 404 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 SPAG7O75391 227 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 PBX3P40426 434 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 NCKAP1LP55160 1127 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 LONRF1Q17RB8 773 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 TAOK1Q7L7X3 1001 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 TRMT13Q9NUP7 481 aaKnown RBP10.66□□□□□ -0.7
TOP3A-208ENST00000542570 CALCOCO1Q9P1Z2 691 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 MAFBQ9Y5Q3 323 aaPredicted RBP10.66□□□□□ -0.7
TOP3A-208ENST00000542570 CHD4Q14839 1912 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 AKAP11Q9UKA4 1901 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 KPNA7A9QM74 516 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 FAM200BP0CF97 657 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 CA4P22748 312 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 RFC1P35251 1148 aaPredicted RBP10.66□□□□□ -0.7
TOP3A-208ENST00000542570 BRCC3P46736 316 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 SLC12A2P55011 1212 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 TFDP2Q14188 446 aa10.66□□□□□ -0.7
TOP3A-208ENST00000542570 ZRSR2Q15696 482 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms