RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 THP07101 528 aa11.7□□□□□ -0.54
SCG3-202ENST00000542355 CCL5P13501 91 aa11.7□□□□□ -0.54
SCG3-202ENST00000542355 RNASE9P60153 205 aaKnown RBP11.7□□□□□ -0.54
SCG3-202ENST00000542355 CKAP4Q07065 602 aaKnown RBP11.7□□□□□ -0.54
SCG3-202ENST00000542355 DSC3Q14574 896 aa11.7□□□□□ -0.54
SCG3-202ENST00000542355 SOWAHAQ2M3V2 549 aa11.7□□□□□ -0.54
SCG3-202ENST00000542355 CCDC181Q5TID7 509 aa11.7□□□□□ -0.54
SCG3-202ENST00000542355 DENND1BQ6P3S1 775 aa11.7□□□□□ -0.54
SCG3-202ENST00000542355 TRAF7Q6Q0C0 670 aa11.7□□□□□ -0.54
SCG3-202ENST00000542355 RSRC2Q7L4I2 434 aaKnown RBP11.7□□□□□ -0.54
SCG3-202ENST00000542355 MRPL10Q7Z7H8 261 aaKnown RBP11.7□□□□□ -0.54
SCG3-202ENST00000542355 PHF13Q86YI8 300 aaPredicted RBP11.7□□□□□ -0.54
SCG3-202ENST00000542355 TTC39CQ8N584 583 aa11.7□□□□□ -0.54
SCG3-202ENST00000542355 VCPIP1Q96JH7 1222 aa11.7□□□□□ -0.54
SCG3-202ENST00000542355 ZNF560Q96MR9 790 aa11.7□□□□□ -0.54
SCG3-202ENST00000542355 NT5C1AQ9BXI3 368 aa11.7□□□□□ -0.54
SCG3-202ENST00000542355 ZNF518BQ9C0D4 1074 aa11.7□□□□□ -0.54
SCG3-202ENST00000542355 SMARCAL1Q9NZC9 954 aa11.7□□□□□ -0.54
SCG3-202ENST00000542355 EHD2Q9NZN4 543 aa11.7□□□□□ -0.54
SCG3-202ENST00000542355 CACNG4Q9UBN1 327 aa11.7□□□□□ -0.54
SCG3-202ENST00000542355 SQORQ9Y6N5 450 aa11.7□□□□□ -0.54
SCG3-202ENST00000542355 LSM8O95777 96 aaKnown RBP11.69□□□□□ -0.54
SCG3-202ENST00000542355 VDRP11473 427 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 MMP8P22894 467 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 PNPLA4P41247 253 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 PAFAH1B1P43034 410 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 TAF6P49848 677 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 CDK7P50613 346 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 C1QBPQ07021 282 aaKnown RBP11.69□□□□□ -0.54
SCG3-202ENST00000542355 MBTPS1Q14703 1052 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 LIN9Q5TKA1 542 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 PPP1R2P3Q6NXS1 205 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 C12orf29Q8N999 325 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 OR6B3Q8NGW1 331 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 HES6Q96HZ4 224 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 TSPYL2Q9H2G4 693 aaPredicted RBP11.69□□□□□ -0.54
SCG3-202ENST00000542355 FAM124BQ9H5Z6 455 aaPredicted RBP11.69□□□□□ -0.54
SCG3-202ENST00000542355 AVENQ9NQS1 362 aaPredicted RBP11.69□□□□□ -0.54
SCG3-202ENST00000542355 SLC38A7Q9NVC3 462 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 ANAPC7Q9UJX3 599 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 HSPA6P17066 643 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 COMTP21964 271 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 LRPAP1P30533 357 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 ABL2P42684 1182 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 RAB27AP51159 221 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 SCNN1GP51170 649 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 LILRA4P59901 499 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 PTP4A2Q12974 167 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 CFAP221Q4G0U5 840 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 ACOT1Q86TX2 421 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 ERICH1Q86X53 443 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 NOA1Q8NC60 698 aaKnown RBP11.69□□□□□ -0.54
SCG3-202ENST00000542355 LHX5Q9H2C1 402 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 GDAP2Q9NXN4 497 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 PCDHB8Q9UN66 801 aa11.69□□□□□ -0.54
SCG3-202ENST00000542355 A8MXQ7 604 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 MICAL2O94851 1124 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 POMCP01189 267 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 IGFBP6P24592 240 aaPredicted RBP11.68□□□□□ -0.54
SCG3-202ENST00000542355 CDH5P33151 784 aaPredicted RBP11.68□□□□□ -0.54
SCG3-202ENST00000542355 MAMLD1Q13495 774 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 CNGA2Q16280 664 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 SV2CQ496J9 727 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 SGO2Q562F6 1265 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 C11orf63Q6NUN7 778 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 FAM126BQ8IXS8 530 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 EFCAB3Q8N7B9 438 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 APPL2Q8NEU8 664 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 RABGGTAQ92696 567 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 PGBD4Q96DM1 585 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 TRIM7Q9C029 511 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 RSAD1Q9HA92 442 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 MRPL47Q9HD33 250 aaKnown RBP11.68□□□□□ -0.54
SCG3-202ENST00000542355 OGDHLQ9ULD0 1010 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 KIAA1257Q9ULG3 409 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 NME7Q9Y5B8 376 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 CITO14578 2027 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 MYO1FO00160 1098 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 O00370 1275 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 HCRTO43612 131 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 CEP104O60308 925 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 GJB6O95452 261 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 PDGFRBP09619 1106 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 LMO2P25791 158 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 GNL1P36915 607 aaPredicted RBP11.68□□□□□ -0.54
SCG3-202ENST00000542355 CLCNKBP51801 687 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 ATN1P54259 1190 aaPredicted RBP11.68□□□□□ -0.54
SCG3-202ENST00000542355 LRRC8DQ7L1W4 858 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 RTN4RL1Q86UN2 441 aaPredicted RBP11.68□□□□□ -0.54
SCG3-202ENST00000542355 CPNE8Q86YQ8 564 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 SPATA4Q8NEY3 305 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 UBA3Q8TBC4 463 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 PBKQ96KB5 322 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 RPGRIP1Q96KN7 1286 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 PARVAQ9NVD7 372 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 RNF14Q9UBS8 474 aa11.68□□□□□ -0.54
SCG3-202ENST00000542355 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.68□□□□□ -0.54
SCG3-202ENST00000542355 M0QYV0 167 aa11.67□□□□□ -0.54
SCG3-202ENST00000542355 DDX3YO15523 660 aaKnown RBP11.67□□□□□ -0.54
SCG3-202ENST00000542355 SPOPO43791 374 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms