RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 PDCD11Q14690 1871 aaKnown RBP18.77■□□□□ 0.6
TRPT1-212ENST00000542040 ZDBF2Q9HCK1 2354 aa18.76■□□□□ 0.59
TRPT1-212ENST00000542040 SOBPA7XYQ1 873 aa18.76■□□□□ 0.59
TRPT1-212ENST00000542040 CSH1P0DML2 217 aa18.76■□□□□ 0.59
TRPT1-212ENST00000542040 CSH2P0DML3 217 aa18.76■□□□□ 0.59
TRPT1-212ENST00000542040 HAPLN1P10915 354 aaPredicted RBP18.76■□□□□ 0.59
TRPT1-212ENST00000542040 TNNI1P19237 187 aa18.76■□□□□ 0.59
TRPT1-212ENST00000542040 DDX6P26196 483 aaKnown RBP eCLIP18.76■□□□□ 0.59
TRPT1-212ENST00000542040 GABRR2P28476 465 aa18.76■□□□□ 0.59
TRPT1-212ENST00000542040 CCR2P41597 374 aa18.76■□□□□ 0.59
TRPT1-212ENST00000542040 MLLT6P55198 1093 aaPredicted RBP18.76■□□□□ 0.59
TRPT1-212ENST00000542040 KRT85P78386 507 aa18.76■□□□□ 0.59
TRPT1-212ENST00000542040 PSMD2Q13200 908 aa18.76■□□□□ 0.59
TRPT1-212ENST00000542040 XXYLT1Q8NBI6 393 aa18.76■□□□□ 0.59
TRPT1-212ENST00000542040 IER2Q9BTL4 223 aa18.76■□□□□ 0.59
TRPT1-212ENST00000542040 ABCB6Q9NP58 842 aa18.76■□□□□ 0.59
TRPT1-212ENST00000542040 LTB4R2Q9NPC1 389 aa18.76■□□□□ 0.59
TRPT1-212ENST00000542040 INTS13Q9NVM9 706 aa18.76■□□□□ 0.59
TRPT1-212ENST00000542040 SPATA6Q9NWH7 488 aaPredicted RBP18.76■□□□□ 0.59
TRPT1-212ENST00000542040 DDX43Q9NXZ2 648 aaKnown RBP18.76■□□□□ 0.59
TRPT1-212ENST00000542040 OBP2AQ9NY56 170 aa18.76■□□□□ 0.59
TRPT1-212ENST00000542040 SNX9Q9Y5X1 595 aa18.76■□□□□ 0.59
TRPT1-212ENST00000542040 HEPACAM2A8MVW5 462 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 SLFN14P0C7P3 912 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 WEE1P30291 646 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 PLCB2Q00722 1185 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 GRM2Q14416 872 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 SNRNP35Q16560 246 aaKnown RBP18.75■□□□□ 0.59
TRPT1-212ENST00000542040 GPR158Q5T848 1215 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 C4orf50Q6ZRC1 276 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 SPATA2LQ8IUW3 424 aaPredicted RBP18.75■□□□□ 0.59
TRPT1-212ENST00000542040 PDCL2Q8N4E4 241 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 SHKBP1Q8TBC3 707 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 LEO1Q8WVC0 666 aaPredicted RBP18.75■□□□□ 0.59
TRPT1-212ENST00000542040 HPDLQ96IR7 371 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 TMEM209Q96SK2 561 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 PHOX2BQ99453 314 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 PLA2G2FQ9BZM2 168 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 FOXQ1Q9C009 403 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 MTMR12Q9C0I1 747 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 IKZF4Q9H2S9 585 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 TASP1Q9H6P5 420 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 C8orf33Q9H7E9 229 aaPredicted RBP18.75■□□□□ 0.59
TRPT1-212ENST00000542040 ZNF334Q9HCZ1 680 aaPredicted RBP18.75■□□□□ 0.59
TRPT1-212ENST00000542040 EHD2Q9NZN4 543 aa18.75■□□□□ 0.59
TRPT1-212ENST00000542040 DOCK8Q8NF50 2099 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 CHADO15335 359 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 FAM163BP0C2L3 166 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 GJA1P17302 382 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 AFMP43652 599 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 RPS9P46781 194 aaKnown RBP18.74■□□□□ 0.59
TRPT1-212ENST00000542040 AP3M2P53677 418 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 DNM1Q05193 864 aaKnown RBP18.74■□□□□ 0.59
TRPT1-212ENST00000542040 TRPC3Q13507 836 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 BECN1Q14457 450 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 ARHGAP29Q52LW3 1261 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 VITQ6UXI7 678 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 TMC8Q8IU68 726 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 ARID3BQ8IVW6 561 aaPredicted RBP18.74■□□□□ 0.59
TRPT1-212ENST00000542040 ADGRF2Q8IZF7 708 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 TMEM130Q8N3G9 435 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 FSIP1Q8NA03 581 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 EXOC4Q96A65 974 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 SPATA32Q96LK8 384 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 ZSWIM3Q96MP5 696 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 DNAJC25Q9H1X3 360 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 HEBP1Q9NRV9 189 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 AGPAT3Q9NRZ7 376 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 EXOC1Q9NV70 894 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 FBXO4Q9UKT5 387 aa18.74■□□□□ 0.59
TRPT1-212ENST00000542040 MOSPD3O75425 235 aa18.73■□□□□ 0.59
TRPT1-212ENST00000542040 VNN2O95498 520 aa18.73■□□□□ 0.59
TRPT1-212ENST00000542040 CMA1P23946 247 aa18.73■□□□□ 0.59
TRPT1-212ENST00000542040 FCARP24071 287 aa18.73■□□□□ 0.59
TRPT1-212ENST00000542040 AVPR1AP37288 418 aa18.73■□□□□ 0.59
TRPT1-212ENST00000542040 KPNA1P52294 538 aaPredicted RBP18.73■□□□□ 0.59
TRPT1-212ENST00000542040 AMPD2Q01433 879 aa18.73■□□□□ 0.59
TRPT1-212ENST00000542040 KNOP1Q1ED39 458 aaKnown RBP18.73■□□□□ 0.59
TRPT1-212ENST00000542040 ZNF528Q3MIS6 628 aa18.73■□□□□ 0.59
TRPT1-212ENST00000542040 INTS6LQ5JSJ4 861 aaKnown RBP18.73■□□□□ 0.59
TRPT1-212ENST00000542040 EPM2AIP1Q7L775 607 aaPredicted RBP18.73■□□□□ 0.59
TRPT1-212ENST00000542040 FRMD5Q7Z6J6 570 aa18.73■□□□□ 0.59
TRPT1-212ENST00000542040 FAM3CQ92520 227 aa18.73■□□□□ 0.59
TRPT1-212ENST00000542040 MRPS31Q92665 395 aaKnown RBP18.73■□□□□ 0.59
TRPT1-212ENST00000542040 FUBP3Q96I24 572 aaKnown RBP eCLIP18.73■□□□□ 0.59
TRPT1-212ENST00000542040 MMS19Q96T76 1030 aa18.73■□□□□ 0.59
TRPT1-212ENST00000542040 LRRC3Q9BY71 257 aa18.73■□□□□ 0.59
TRPT1-212ENST00000542040 SCAND2PQ9GZW5 306 aaPredicted RBP18.73■□□□□ 0.59
TRPT1-212ENST00000542040 CRISPLD1Q9H336 500 aa18.73■□□□□ 0.59
TRPT1-212ENST00000542040 L1RE1Q9UN81 338 aa18.73■□□□□ 0.59
TRPT1-212ENST00000542040 EXOC3O60645 756 aa18.72■□□□□ 0.59
TRPT1-212ENST00000542040 PHACTR2O75167 634 aa18.72■□□□□ 0.59
TRPT1-212ENST00000542040 DLATP10515 647 aaKnown RBP18.72■□□□□ 0.59
TRPT1-212ENST00000542040 TRIM21P19474 475 aaKnown RBP18.72■□□□□ 0.59
TRPT1-212ENST00000542040 VIPR2P41587 438 aa18.72■□□□□ 0.59
TRPT1-212ENST00000542040 CYP2J2P51589 502 aa18.72■□□□□ 0.59
TRPT1-212ENST00000542040 PSMD6Q15008 389 aa18.72■□□□□ 0.59
TRPT1-212ENST00000542040 CBWD2Q8IUF1 395 aa18.72■□□□□ 0.59
TRPT1-212ENST00000542040 NELFCDQ8IXH7 590 aa18.72■□□□□ 0.59
TRPT1-212ENST00000542040 CELF5Q8N6W0 485 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms