RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 ZNF783Q6ZMS7 281 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 CHST15Q7LFX5 561 aaPredicted RBP3.99□□□□□ -1.77
USP28-210ENST00000542033 FAM156AQ8NDB6 213 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 SNX19Q92543 992 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 TTC17Q96AE7 1141 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 MRGPRX1Q96LB2 322 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 ADAM2Q99965 735 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 WDR11Q9BZH6 1224 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 TMEM74BQ9NUR3 256 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 BCCIPQ9P287 314 aaKnown RBP eCLIP3.99□□□□□ -1.77
USP28-210ENST00000542033 DKK2Q9UBU2 259 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 PACSIN3Q9UKS6 424 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 TPCN1Q9ULQ1 816 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 AGAP1Q9UPQ3 857 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 PLEKHM1Q9Y4G2 1056 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 A0A1W2PS29 197 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 PIPSLA2A3N6 862 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 A6NNZ2 444 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 E7ENX8 843 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 GOLIM4O00461 696 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 SOAT2O75908 522 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 SUN1O94901 812 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 UNC5CO95185 931 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 GCP02774 474 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 HRGP04196 525 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 THP07101 528 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 GRPP07492 148 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 HKR1P10072 659 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 PIM1P11309 404 aaPredicted RBP3.98□□□□□ -1.77
USP28-210ENST00000542033 NPR1P16066 1061 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 ITGALP20701 1170 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 TAP2Q03519 686 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 FSTL1Q12841 308 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 DYRK1AQ13627 763 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 SLC44A4Q53GD3 710 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 LAYNQ6UX15 382 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 PSD4Q8NDX1 1056 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 FAM46DQ8NEK8 389 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 OR6B3Q8NGW1 331 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 SVIPQ8NHG7 77 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 IL31RAQ8NI17 732 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 KBTBD7Q8WVZ9 684 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 LRTOMTQ8WZ04 291 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 CAVIN3Q969G5 261 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 NACC2Q96BF6 587 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 TIFAQ96CG3 184 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 PTCD3Q96EY7 689 aaKnown RBP3.98□□□□□ -1.77
USP28-210ENST00000542033 SUCLG2Q96I99 432 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 COQ10AQ96MF6 247 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 MOGAT1Q96PD6 335 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 P2RX7Q99572 595 aaKnown RBP3.98□□□□□ -1.77
USP28-210ENST00000542033 IKZF4Q9H2S9 585 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 TOR3AQ9H497 397 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 UNKLQ9H9P5 680 aaKnown RBP3.98□□□□□ -1.77
USP28-210ENST00000542033 CASS4Q9NQ75 786 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 INTS13Q9NVM9 706 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.98□□□□□ -1.77
USP28-210ENST00000542033 CTTNBP2NLQ9P2B4 639 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 DMTF1Q9Y222 760 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 MED16Q9Y2X0 877 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 TMX2Q9Y320 296 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 RAD54BQ9Y620 910 aa3.98□□□□□ -1.77
USP28-210ENST00000542033 F5H697 171 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 TBC1D4O60343 1298 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 BRAFP15056 766 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 RHCEP18577 417 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 CHRM3P20309 590 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 FDXRP22570 491 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 TGM1P22735 817 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 NPTX2P47972 431 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 MC2RQ01718 297 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 SATB1Q01826 763 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 RHDQ02161 417 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 KRTAP1-1Q07627 177 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 TCF15Q12870 199 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 POLD3Q15054 466 aaPredicted RBP3.97□□□□□ -1.77
USP28-210ENST00000542033 CD300EQ496F6 205 aaPredicted RBP3.97□□□□□ -1.77
USP28-210ENST00000542033 SYCP2LQ5T4T6 812 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 HECTD2Q5U5R9 776 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 LMBRD2Q68DH5 695 aaPredicted RBP3.97□□□□□ -1.77
USP28-210ENST00000542033 SP5Q6BEB4 398 aaPredicted RBP3.97□□□□□ -1.77
USP28-210ENST00000542033 SWSAP1Q6NVH7 229 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 TAF2Q6P1X5 1199 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 KSR2Q6VAB6 950 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 Q6YL49 198 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 Q6ZPA2 131 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 MICALCLQ6ZW33 695 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 PPP1R32Q7Z5V6 425 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 GPR149Q86SP6 731 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 COL23A1Q86Y22 540 aaPredicted RBP3.97□□□□□ -1.77
USP28-210ENST00000542033 VRK3Q8IV63 474 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 ADGRG5Q8IZF4 528 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 Q8NA96 180 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 POC1BQ8TC44 478 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 ASB10Q8WXI3 467 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 SLC9A6Q92581 669 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 MPHOSPH6Q99547 160 aaKnown RBP3.97□□□□□ -1.77
USP28-210ENST00000542033 HEPHQ9BQS7 1158 aa3.97□□□□□ -1.77
USP28-210ENST00000542033 C22orf23Q9BZE7 217 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms