RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 SEPT9Q9UHD8 586 aaPredicted RBP9.65□□□□□ -0.86
THBS3-211ENST00000541990 FAM47DPA6NHR8 397 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 SLC16A4O15374 487 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 FAM13AO94988 1023 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 RTN3O95197 1032 aaPredicted RBP9.65□□□□□ -0.87
THBS3-211ENST00000541990 EYA4O95677 639 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 MYCP01106 439 aaPredicted RBP9.65□□□□□ -0.87
THBS3-211ENST00000541990 HSPA6P17066 643 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 RPA3P35244 121 aaPredicted RBP9.65□□□□□ -0.87
THBS3-211ENST00000541990 ADCYAP1R1P41586 468 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 QARSP47897 775 aaKnown RBP9.65□□□□□ -0.87
THBS3-211ENST00000541990 RARRES1P49788 294 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 PEX3P56589 373 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 IGBP1P78318 339 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 PPP3CAQ08209 521 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 TRAF1Q13077 416 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 SETDB1Q15047 1291 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 RCN1Q15293 331 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 MFN1Q8IWA4 741 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 GPRC5AQ8NFJ5 357 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 BSNDQ8WZ55 320 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 CEP170P1Q96L14 293 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 LRRC19Q9H756 370 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 AGPAT3Q9NRZ7 376 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 WDR35Q9P2L0 1181 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 KANSL3Q9P2N6 904 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 SLC9A2Q9UBY0 812 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 MTUS1Q9ULD2 1270 aa9.65□□□□□ -0.87
THBS3-211ENST00000541990 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.65□□□□□ -0.87
THBS3-211ENST00000541990 EMSYQ7Z589 1322 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 WDR91A4D1P6 747 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 GOLGA8IPA6NC78 632 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 GOLGA8JA6NMD2 632 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 NVLO15381 856 aaKnown RBP9.64□□□□□ -0.87
THBS3-211ENST00000541990 ALDH3A1P30838 453 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 GCLMP48507 274 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 PKN2Q16513 984 aaKnown RBP9.64□□□□□ -0.87
THBS3-211ENST00000541990 ANKS1BQ7Z6G8 1248 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 CDR2LQ86X02 465 aaPredicted RBP9.64□□□□□ -0.87
THBS3-211ENST00000541990 TMEM130Q8N3G9 435 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 GLIS1Q8NBF1 620 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 MAML1Q92585 1016 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 SNF8Q96H20 258 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 CADM1Q9BY67 442 aaKnown RBP9.64□□□□□ -0.87
THBS3-211ENST00000541990 NPHS2Q9NP85 383 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 WHRNQ9P202 907 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 DCTN4Q9UJW0 460 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 USH1CQ9Y6N9 552 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 C2orf71A6NGG8 1288 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 POC1B-GALNT4F8VUJ3 575 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 ATP2A1O14983 1001 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 CYP26A1O43174 497 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 ADCY6O43306 1168 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 RNF8O76064 485 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 P4HBP07237 508 aaKnown RBP9.64□□□□□ -0.87
THBS3-211ENST00000541990 CYP2B6P20813 491 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 ADCY8P40145 1251 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 HADHBP55084 474 aaKnown RBP9.64□□□□□ -0.87
THBS3-211ENST00000541990 KPNB1Q14974 876 aaKnown RBP9.64□□□□□ -0.87
THBS3-211ENST00000541990 SEZ6Q53EL9 994 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 ACSBG2Q5FVE4 666 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 OTOAQ7RTW8 1153 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 MTDHQ86UE4 582 aaKnown RBP9.64□□□□□ -0.87
THBS3-211ENST00000541990 ZC3H18Q86VM9 953 aaKnown RBP9.64□□□□□ -0.87
THBS3-211ENST00000541990 C12orf50Q8NA57 414 aaPredicted RBP9.64□□□□□ -0.87
THBS3-211ENST00000541990 EPS8L1Q8TE68 723 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 WDR60Q8WVS4 1066 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 KIFAP3Q92845 792 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 ZNF653Q96CK0 615 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 RIT2Q99578 217 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 NAP1L4Q99733 375 aaKnown RBP9.64□□□□□ -0.87
THBS3-211ENST00000541990 EPAS1Q99814 870 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 POLR3CQ9BUI4 534 aaPredicted RBP9.64□□□□□ -0.87
THBS3-211ENST00000541990 UBN1Q9NPG3 1134 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 LGALS13Q9UHV8 139 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 STARD13Q9Y3M8 1113 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 WASF2Q9Y6W5 498 aa9.64□□□□□ -0.87
THBS3-211ENST00000541990 PTPRFP10586 1907 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 A0A1W2PPM1 405 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 ATP5DP30049 168 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 GCLCP48506 637 aaPredicted RBP9.63□□□□□ -0.87
THBS3-211ENST00000541990 OAZ1P54368 228 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 IL9RQ01113 521 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 PRKCEQ02156 737 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 LBRQ14739 615 aaKnown RBP9.63□□□□□ -0.87
THBS3-211ENST00000541990 TAF1CQ15572 869 aaPredicted RBP9.63□□□□□ -0.87
THBS3-211ENST00000541990 SLC5A9Q2M3M2 681 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 CTC1Q2NKJ3 1217 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 SGSM1Q2NKQ1 1148 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 EPC2Q52LR7 807 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 SNX30Q5VWJ9 437 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 C4orf50Q6ZRC1 276 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 DPP9Q86TI2 863 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 LRRC71Q8N4P6 559 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 RBBP8NLQ8NC74 664 aaPredicted RBP9.63□□□□□ -0.87
THBS3-211ENST00000541990 CHST13Q8NET6 341 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 RFWD2Q8NHY2 731 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 NPLOC4Q8TAT6 608 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 PLEKHO2Q8TD55 490 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 LRRC8CQ8TDW0 803 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms