RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 COASYQ13057 564 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 EMC2Q15006 297 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 COLEC12Q5KU26 742 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 NUGGCQ68CJ6 796 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 LRRC74BQ6ZQY2 392 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 MTFMTQ96DP5 389 aaKnown RBP6.59□□□□□ -1.35
DMD-228ENST00000541735 DHTKD1Q96HY7 919 aaPredicted RBP6.59□□□□□ -1.35
DMD-228ENST00000541735 BRIP1Q9BX63 1249 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 INTS2Q9H0H0 1204 aaKnown RBP6.59□□□□□ -1.35
DMD-228ENST00000541735 CAAP1Q9H8G2 361 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 EML4Q9HC35 981 aaKnown RBP6.59□□□□□ -1.35
DMD-228ENST00000541735 ZFATQ9P243 1243 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 ADAM21Q9UKJ8 722 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 SIK3Q9Y2K2 1263 aa6.59□□□□□ -1.35
DMD-228ENST00000541735 hCG_2014768A0A024R1R8 64 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 H3BRB1 525 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 CD4P01730 458 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 TUBB4AP04350 444 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 TBXAS1P24557 533 aaPredicted RBP6.59□□□□□ -1.36
DMD-228ENST00000541735 ARF5P84085 180 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 CLEC16AQ2KHT3 1053 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 C1orf146Q5VVC0 180 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 CENPPQ6IPU0 288 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 ALKBH5Q6P6C2 394 aaKnown RBP6.59□□□□□ -1.36
DMD-228ENST00000541735 ARHGEF25Q86VW2 580 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 CLEC4FQ8N1N0 589 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 KCNV2Q8TDN2 545 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 SLC4A9Q96Q91 983 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 ADI1Q9BV57 179 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 CATSPERBQ9H7T0 1116 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 KRT84Q9NSB2 600 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 USP18Q9UMW8 372 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 DYRK1BQ9Y463 629 aa6.59□□□□□ -1.36
DMD-228ENST00000541735 RASSF10A6NK89 507 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 CYB561D2O14569 222 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 KLHL18O94889 574 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 RHOCP08134 193 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 NOS3P29474 1203 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 CLCN6P51797 869 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 POU4F1Q01851 419 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 CNTN1Q12860 1018 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 MRPL28Q13084 256 aaKnown RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 DRAP1Q14919 205 aaPredicted RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 EDRF1Q3B7T1 1238 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 SH3BP5LQ7L8J4 393 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 DDX42Q86XP3 938 aaKnown RBP eCLIP6.58□□□□□ -1.36
DMD-228ENST00000541735 CDKL3Q8IVW4 592 aaPredicted RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 TMEM199Q8N511 208 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 ATP6V0D2Q8N8Y2 350 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 SYT2Q8N9I0 419 aaPredicted RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 FBXO41Q8TF61 875 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 EXOC2Q96KP1 924 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 FMO2Q99518 471 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 UBE2OQ9C0C9 1292 aaKnown RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 SAE1Q9UBE0 346 aaPredicted RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 IP6K2Q9UHH9 426 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 GMEB2Q9UKD1 530 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 NUDT5Q9UKK9 219 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 SYNGAP1Q96PV0 1343 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 SH2B2O14492 632 aaPredicted RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 STRNO43815 780 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 SRP72O76094 671 aaKnown RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 EPHB2P29323 1055 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 BOP1Q14137 746 aaKnown RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 SLC15A2Q16348 729 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 ZMYM1Q5SVZ6 1142 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 TNS4Q8IZW8 715 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 SCAIQ8N9R8 606 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 CYGBQ8WWM9 190 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 REXO5Q96IC2 774 aaKnown RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 MED15Q96RN5 788 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 FOXP1Q9H334 677 aaPredicted RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 NDST4Q9H3R1 872 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 ZDHHC6Q9H6R6 413 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 DDIT4Q9NX09 232 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 TUBE1Q9UJT0 475 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 DSEQ9UL01 958 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 ZFYVE9O95405 1425 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 M0QYT0 321 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 TRDMT1O14717 391 aaKnown RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 KIF1CO43896 1103 aaKnown RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 KRT38O76015 456 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 TUBBP07437 444 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 SUPT20HL2P0C7V6 817 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 ARSEP51690 589 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 NCOA4Q13772 614 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 CBFBQ13951 182 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 TRIP4Q15650 581 aaPredicted RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 CCDC81Q6ZN84 652 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 OTOP2Q7RTS6 562 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 ST13P5Q8NFI4 369 aaPredicted RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 PAGE5Q96GU1 130 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 XPO6Q96QU8 1125 aaKnown RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 IDI2Q9BXS1 227 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 KCTD10Q9H3F6 313 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 PDE11AQ9HCR9 933 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 DDX28Q9NUL7 540 aaKnown RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 RBM7Q9Y580 266 aaKnown RBP6.58□□□□□ -1.36
DMD-228ENST00000541735 XYLBO75191 536 aa6.58□□□□□ -1.36
DMD-228ENST00000541735 TADA3O75528 432 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms