RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 SLC12A1Q13621 1099 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 PLS1Q14651 629 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 SLMAPQ14BN4 828 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 SEC23AQ15436 765 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 BAK1Q16611 211 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 CCDC157Q569K6 752 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 FIGNQ5HY92 759 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 C1orf141Q5JVX7 400 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 ARL6IP4Q66PJ3 421 aaKnown RBP6.03□□□□□ -1.44
DDB1-219ENST00000541513 CIAPIN1Q6FI81 312 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 FBXO38Q6PIJ6 1188 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 NUP54Q7Z3B4 507 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 SLFN11Q7Z7L1 901 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 LURAP1LQ8IV03 231 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 USHBP1Q8N6Y0 703 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 WHAMMQ8TF30 809 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 RAPGEF4Q8WZA2 1011 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 RBM18Q96H35 190 aaKnown RBP6.03□□□□□ -1.44
DDB1-219ENST00000541513 METTL22Q9BUU2 404 aaPredicted RBP6.03□□□□□ -1.44
DDB1-219ENST00000541513 FOXQ1Q9C009 403 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 SEMA4AQ9H3S1 761 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 RABEP2Q9H5N1 569 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 YY1AP1Q9H869 796 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 STK32BQ9NY57 414 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 CPSF2Q9P2I0 782 aaKnown RBP6.03□□□□□ -1.44
DDB1-219ENST00000541513 CPNE7Q9UBL6 633 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 EIF2B4Q9UI10 523 aaKnown RBP6.03□□□□□ -1.44
DDB1-219ENST00000541513 NAGPAQ9UK23 515 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 TMPRSS11EQ9UL52 423 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 PCDHGB4Q9UN71 923 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 ITGB4P16144 1822 aa6.03□□□□□ -1.44
DDB1-219ENST00000541513 BCL9O00512 1426 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 ADAMTS7Q9UKP4 1686 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 TRBV23OR9-2A0A075B6M9 112 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 PRSS38A1L453 326 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 CCDC78A2IDD5 438 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 GOLGA6L22H0YM25 854 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 MPHOSPH10O00566 681 aaKnown RBP6.02□□□□□ -1.45
DDB1-219ENST00000541513 AP3D1O14617 1153 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 MTSS1O43312 755 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 THAP12O43422 761 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 CLASP2O75122 1294 aaKnown RBP6.02□□□□□ -1.45
DDB1-219ENST00000541513 CSPG5O95196 566 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 LPLP06858 475 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 TMEM253P0C7T8 217 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 KITP10721 976 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 MYL4P12829 197 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 CPB1P15086 417 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 IFNAR1P17181 557 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 CD33P20138 364 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 TBXAS1P24557 533 aaPredicted RBP6.02□□□□□ -1.45
DDB1-219ENST00000541513 SDHAP31040 664 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 CCT4P50991 539 aaKnown RBP6.02□□□□□ -1.45
DDB1-219ENST00000541513 PNLIPRP1P54315 467 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 RAD23AP54725 363 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 SLC12A2P55011 1212 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 IL1RL1Q01638 556 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 MC1RQ01726 317 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 DUSP28Q4G0W2 176 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 ZBTB41Q5SVQ8 909 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 ELMSAN1Q6PJG2 1045 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 CDC37L1Q7L3B6 337 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 MIGA2Q7L4E1 593 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 R3HCC1LQ7Z5L2 792 aaKnown RBP6.02□□□□□ -1.45
DDB1-219ENST00000541513 ARMC8Q8IUR7 673 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 PHYKPLQ8IUZ5 450 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 ZFPM1Q8IX07 1006 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 CCDC170Q8IYT3 715 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 MOSPD2Q8NHP6 518 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 GDAP1Q8TB36 358 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 TBC1D22AQ8WUA7 517 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 FAM120BQ96EK7 910 aaKnown RBP6.02□□□□□ -1.45
DDB1-219ENST00000541513 CHFRQ96EP1 664 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 COG8Q96MW5 612 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 ITPAQ9BY32 194 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 MLXIPQ9HAP2 919 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 EPB41L4AQ9HCS5 686 aaPredicted RBP6.02□□□□□ -1.45
DDB1-219ENST00000541513 SEPSECSQ9HD40 501 aaKnown RBP6.02□□□□□ -1.45
DDB1-219ENST00000541513 EIF2B3Q9NR50 452 aaKnown RBP6.02□□□□□ -1.45
DDB1-219ENST00000541513 CLEC1BQ9P126 229 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.02□□□□□ -1.45
DDB1-219ENST00000541513 DPP7Q9UHL4 492 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 SCOCQ9UIL1 159 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 SLC6A14Q9UN76 642 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 DUSP12Q9UNI6 340 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 SCAF8Q9UPN6 1271 aaKnown RBP6.02□□□□□ -1.45
DDB1-219ENST00000541513 USP15Q9Y4E8 981 aaPredicted RBP6.02□□□□□ -1.45
DDB1-219ENST00000541513 PCDHA2Q9Y5H9 948 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 NUMBLQ9Y6R0 609 aa6.02□□□□□ -1.45
DDB1-219ENST00000541513 NHSQ6T4R5 1651 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 TCRBV5S4A2TA0A5A2 114 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 KRBA1A5PL33 1030 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
DDB1-219ENST00000541513 ELL2O00472 640 aaPredicted RBP6.01□□□□□ -1.45
DDB1-219ENST00000541513 MAN2B1O00754 1011 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 CAPN9O14815 690 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 SPTLC2O15270 562 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 SGTAO43765 313 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 AKR1B10O60218 316 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 SIN3BO75182 1162 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms