RNA–Protein interactions for RNA: ENST00000541372.1

SLC3A2-216, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 269 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-216ENST00000541372 HLA-DRAP01903 254 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 LRG1P02750 347 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 PDGFRBP09619 1106 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 PTPN2P17706 415 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 ACAT1P24752 427 aaKnown RBP16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 PCSK1P29120 753 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 TSPY1Q01534 308 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 TWF1Q12792 350 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 ZNF699Q32M78 642 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 ZNF667Q5HYK9 610 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 KRT39Q6A163 491 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 FAM171BQ6P995 826 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 OTOP3Q7RTS5 596 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 RNF135Q8IUD6 432 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 TAS1R2Q8TE23 839 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 C2orf15Q8WU43 125 aaKnown RBP16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 ELMO3Q96BJ8 720 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 PKMYT1Q99640 499 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 SRRTQ9BXP5 876 aaKnown RBP16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 SNX25Q9H3E2 840 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 METTL14Q9HCE5 456 aaKnown RBP16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 TMLHEQ9NVH6 421 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 RWDD2AQ9UIY3 292 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 C5orf42Q9H799 3197 aa16.5■□□□□ 0.23
SLC3A2-216ENST00000541372 C2CD4DB7Z1M9 353 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 HCRTO43612 131 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 ASS1P00966 412 aaKnown RBP16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 SP100P23497 879 aaPredicted RBP16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 ALDH1A3P47895 512 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 TUFMP49411 452 aaKnown RBP16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 CDR1P51861 262 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 CDH8P55286 799 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 NTHL1P78549 312 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 NFE2Q16621 373 aaPredicted RBP16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 INTS6LQ5JSJ4 861 aaKnown RBP16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 ZDHHC14Q8IZN3 488 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 PLCD3Q8N3E9 789 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 OR6B3Q8NGW1 331 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 ACSF2Q96CM8 615 aaPredicted RBP16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 ZNF512Q96ME7 567 aaPredicted RBP16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 MED15Q96RN5 788 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 MMRN2Q9H8L6 949 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 HCFC1R1Q9NWW0 138 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 CEP72Q9P209 647 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 LIMD1Q9UGP4 676 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 GTF3C4Q9UKN8 822 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 CDH9Q9ULB4 789 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 PCDHB5Q9Y5E4 795 aa16.49■□□□□ 0.23
SLC3A2-216ENST00000541372 CLUHO75153 1309 aa16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 MYBPHLA2RUH7 354 aa16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 N4BP1O75113 896 aaKnown RBP16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 ATP2C2O75185 946 aa16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 GNA14O95837 355 aa16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 HAPLN1P10915 354 aaPredicted RBP16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 P4HA1P13674 534 aa16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 FSHRP23945 695 aa16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 EPHB3P54753 998 aa16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 NLRP12P59046 1061 aa16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 PABPC1LQ4VXU2 614 aaKnown RBP16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 TTC9BQ8N6N2 239 aa16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 SPPL2BQ8TCT7 592 aa16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 SEMA4DQ92854 862 aa16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 KHSRPQ92945 711 aaKnown RBP eCLIP16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 SLC35C1Q96A29 364 aa16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 PI4K2AQ9BTU6 479 aa16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 AVENQ9NQS1 362 aaPredicted RBP16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 YIPF1Q9Y548 306 aa16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 NME7Q9Y5B8 376 aa16.48■□□□□ 0.23
SLC3A2-216ENST00000541372 LRRN2O75325 713 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 SOAT2O75908 522 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 FGFR1OPO95684 399 aaKnown RBP16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 MBD3O95983 291 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 RHOP08100 348 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 PIK3CAP42336 1068 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 PLD1Q13393 1074 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 MGAT5BQ3V5L5 792 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 CCDC40Q4G0X9 1142 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 DCAF17Q5H9S7 520 aaPredicted RBP16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 TCERG1LQ5VWI1 586 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 IQCEQ6IPM2 695 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 SPOPLQ6IQ16 392 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 RBM43Q6ZSC3 357 aaKnown RBP16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 DNAJB7Q7Z6W7 309 aaPredicted RBP16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 ELMOD1Q8N336 334 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 TDRD5Q8NAT2 981 aaKnown RBP16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 ITFG1Q8TB96 612 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 MYADMQ96S97 322 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 CORO1BQ9BR76 489 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 SDCBP2Q9H190 292 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 SMYD3Q9H7B4 428 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 APOBEC3GQ9HC16 384 aaKnown RBP16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 ABCB6Q9NP58 842 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 CRTAC1Q9NQ79 661 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 RAB20Q9NX57 234 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 ABI2Q9NYB9 513 aaPredicted RBP16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 COQ4Q9Y3A0 265 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 ASB3Q9Y575 518 aa16.47■□□□□ 0.23
SLC3A2-216ENST00000541372 A8MXQ7 604 aa16.46■□□□□ 0.23
SLC3A2-216ENST00000541372 PI4K2BG5E9Z4 385 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms