RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 PRICKLE2Q7Z3G6 844 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 TRMT11Q7Z4G4 463 aaKnown RBP10.35□□□□□ -0.75
YBX3-211ENST00000541351 OR2I1PQ8NGU4 316 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 OSCP1Q8WVF1 389 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 HMGB4Q8WW32 186 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 FGF11Q92914 225 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 MED8Q96G25 268 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 SUSD3Q96L08 255 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 LXNQ9BS40 222 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 POLR3CQ9BUI4 534 aaPredicted RBP10.35□□□□□ -0.75
YBX3-211ENST00000541351 FAM117AQ9C073 453 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 OSBPL3Q9H4L5 887 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 PRDM16Q9HAZ2 1276 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 DUS2Q9NX74 493 aaKnown RBP10.35□□□□□ -0.75
YBX3-211ENST00000541351 RCAN3Q9UKA8 241 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 PTPRBP23467 1997 aa10.35□□□□□ -0.75
YBX3-211ENST00000541351 OTOL1A6NHN0 477 aaPredicted RBP10.34□□□□□ -0.75
YBX3-211ENST00000541351 ZBTB43O43298 467 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 NDUFS2O75306 463 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 NFATC1O95644 943 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 JUPP14923 745 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 ARSAP15289 507 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 SEC13P55735 322 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 TMPRSS3P57727 454 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 GPR17Q13304 367 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 PPP2R5CQ13362 524 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 GLRA4Q5JXX5 417 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 ARMCX5Q6P1M9 558 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 MOXD1Q6UVY6 613 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 NUDT18Q6ZVK8 323 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 RAB11FIP4Q86YS3 637 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 NOSTRINQ8IVI9 506 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 CCDC33Q8N5R6 958 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 C3orf58Q8NDZ4 430 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 SPATA18Q8TC71 538 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 MRPS31Q92665 395 aaKnown RBP10.34□□□□□ -0.75
YBX3-211ENST00000541351 DDX12PQ92771 950 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 FAM20AQ96MK3 541 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 NRSN2Q9GZP1 204 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 DNAJC25Q9H1X3 360 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 PDZD7Q9H5P4 517 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 TM7SF3Q9NS93 570 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 SEPT3Q9UH03 358 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 PCDHB8Q9UN66 801 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 TSC2P49815 1807 aa10.34□□□□□ -0.75
YBX3-211ENST00000541351 CYP3A7-CYP3A51PA0A087WV96 503 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 A0A1B0GTW7 788 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 MYMKA6NI61 221 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 GOLGA8CPA6NN73 597 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 PLK4O00444 970 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 ATXN1LP0C7T5 689 aaKnown RBP10.33□□□□□ -0.76
YBX3-211ENST00000541351 CYP3A7P24462 503 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 U2AF2P26368 475 aaKnown RBP eCLIP10.33□□□□□ -0.765e-8■■■□□ 15
YBX3-211ENST00000541351 ADSSP30520 456 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 ARL2P36404 184 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 MATKP42679 507 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 RCAN1P53805 252 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 CYP4F8P98187 520 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 SCRN1Q12765 414 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 GRIK2Q13002 908 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 MYBPC2Q14324 1141 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 MTF1Q14872 753 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 C20orf194Q5TEA3 1177 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 APOA5Q6Q788 366 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 TRIML1Q8N9V2 468 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 TXNDC5Q8NBS9 432 aaKnown RBP10.33□□□□□ -0.76
YBX3-211ENST00000541351 TMEM176AQ96HP8 235 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 HSPA12BQ96MM6 686 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 NACC1Q96RE7 527 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 CCDC94Q9BW85 323 aaPredicted RBP10.33□□□□□ -0.76
YBX3-211ENST00000541351 SLC46A2Q9BY10 475 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 LNPKQ9C0E8 428 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 NFE2L3Q9Y4A8 694 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 KIF26AQ9ULI4 1882 aaPredicted RBP10.33□□□□□ -0.76
YBX3-211ENST00000541351 KNTC1P50748 2209 aa10.33□□□□□ -0.76
YBX3-211ENST00000541351 PCDH15Q96QU1 1955 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 SMIM28A0A1B0GU29 152 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 TCRBV21S2A2A0A5A6 115 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 FAM149AA5PLN7 773 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 GOLGA8AA7E2F4 631 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 GOLGA8BA8MQT2 603 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 OAZ2O95190 189 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 GLRA2P23416 452 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 GRK6P43250 576 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 TLE3Q04726 772 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 FAM160A1Q05DH4 1040 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 SMARCB1Q12824 385 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 EPHA7Q15375 998 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 CENPPQ6IPU0 288 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 PCSK4Q6UW60 755 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 CD300LGQ6UXG3 332 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 FMNL3Q8IVF7 1028 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 MAB21L3Q8N8X9 362 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 ZNF579Q8NAF0 562 aaKnown RBP10.32□□□□□ -0.76
YBX3-211ENST00000541351 BAHD1Q8TBE0 780 aaPredicted RBP10.32□□□□□ -0.76
YBX3-211ENST00000541351 KCNV2Q8TDN2 545 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 ASAP3Q8TDY4 903 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 TBCKQ8TEA7 893 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 SPIRE2Q8WWL2 714 aa10.32□□□□□ -0.76
YBX3-211ENST00000541351 USP13Q92995 863 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms