RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 OR6B3Q8NGW1 331 aa20.07■□□□□ 0.8
VPS33A-205ENST00000541169 SPPL2BQ8TCT7 592 aa20.07■□□□□ 0.8
VPS33A-205ENST00000541169 KBTBD7Q8WVZ9 684 aa20.07■□□□□ 0.8
VPS33A-205ENST00000541169 JAKMIP2Q96AA8 810 aa20.07■□□□□ 0.8
VPS33A-205ENST00000541169 NECTIN4Q96NY8 510 aa20.07■□□□□ 0.8
VPS33A-205ENST00000541169 ADAM7Q9H2U9 754 aa20.07■□□□□ 0.8
VPS33A-205ENST00000541169 NDST4Q9H3R1 872 aa20.07■□□□□ 0.8
VPS33A-205ENST00000541169 SAMSN1Q9NSI8 373 aaKnown RBP20.07■□□□□ 0.8
VPS33A-205ENST00000541169 CLEC1BQ9P126 229 aa20.07■□□□□ 0.8
VPS33A-205ENST00000541169 PRRG1O14668 218 aa20.06■□□□□ 0.8
VPS33A-205ENST00000541169 LINC01565O15544 149 aa20.06■□□□□ 0.8
VPS33A-205ENST00000541169 ADAM12O43184 909 aa20.06■□□□□ 0.8
VPS33A-205ENST00000541169 TBX10O75333 385 aa20.06■□□□□ 0.8
VPS33A-205ENST00000541169 ZMYND10O75800 440 aa20.06■□□□□ 0.8
VPS33A-205ENST00000541169 CDK11BP21127 795 aaKnown RBP20.06■□□□□ 0.8
VPS33A-205ENST00000541169 ASPAP45381 313 aa20.06■□□□□ 0.8
VPS33A-205ENST00000541169 TUFMP49411 452 aaKnown RBP20.06■□□□□ 0.8
VPS33A-205ENST00000541169 ARPP19P56211 112 aa20.06■□□□□ 0.8
VPS33A-205ENST00000541169 MRPS5P82675 430 aaKnown RBP20.06■□□□□ 0.8
VPS33A-205ENST00000541169 INCA1Q0VD86 236 aa20.06■□□□□ 0.8
VPS33A-205ENST00000541169 SMAD4Q13485 552 aaKnown RBP20.06■□□□□ 0.8
VPS33A-205ENST00000541169 VWA3BQ502W6 1294 aa20.06■□□□□ 0.8
VPS33A-205ENST00000541169 INTS6LQ5JSJ4 861 aaKnown RBP20.06■□□□□ 0.8
VPS33A-205ENST00000541169 GBP6Q6ZN66 633 aa20.06■□□□□ 0.8
VPS33A-205ENST00000541169 C4orf50Q6ZRC1 276 aa20.06■□□□□ 0.8
VPS33A-205ENST00000541169 SMRP1Q8NCR6 262 aa20.06■□□□□ 0.8
VPS33A-205ENST00000541169 FUBP3Q96I24 572 aaKnown RBP eCLIP20.06■□□□□ 0.8
VPS33A-205ENST00000541169 RIPOR3Q96MK2 946 aa20.06■□□□□ 0.8
VPS33A-205ENST00000541169 NT5C1BQ96P26 610 aa20.06■□□□□ 0.8
VPS33A-205ENST00000541169 RTP3Q9BQQ7 232 aa20.06■□□□□ 0.8
VPS33A-205ENST00000541169 FANCLQ9NW38 375 aa20.06■□□□□ 0.8
VPS33A-205ENST00000541169 BARX2Q9UMQ3 279 aaPredicted RBP20.06■□□□□ 0.8
VPS33A-205ENST00000541169 PLXNA3P51805 1871 aa20.05■□□□□ 0.8
VPS33A-205ENST00000541169 LRRC10BA6NIK2 292 aa20.05■□□□□ 0.8
VPS33A-205ENST00000541169 A8MXQ7 604 aa20.05■□□□□ 0.8
VPS33A-205ENST00000541169 XYLBO75191 536 aa20.05■□□□□ 0.8
VPS33A-205ENST00000541169 ADCY1Q08828 1119 aa20.05■□□□□ 0.8
VPS33A-205ENST00000541169 PPM1LQ5SGD2 360 aa20.05■□□□□ 0.8
VPS33A-205ENST00000541169 SCARA3Q6AZY7 606 aa20.05■□□□□ 0.8
VPS33A-205ENST00000541169 ENOSF1Q7L5Y1 443 aa20.05■□□□□ 0.8
VPS33A-205ENST00000541169 EHBP1Q8NDI1 1231 aa20.05■□□□□ 0.8
VPS33A-205ENST00000541169 OR10T2Q8NGX3 314 aa20.05■□□□□ 0.8
VPS33A-205ENST00000541169 SEMA4DQ92854 862 aa20.05■□□□□ 0.8
VPS33A-205ENST00000541169 CEP295NLQ96MC4 621 aa20.05■□□□□ 0.8
VPS33A-205ENST00000541169 SYT15Q9BQS2 421 aa20.05■□□□□ 0.8
VPS33A-205ENST00000541169 ANP32EQ9BTT0 268 aa20.05■□□□□ 0.8
VPS33A-205ENST00000541169 PI4K2AQ9BTU6 479 aa20.05■□□□□ 0.8
VPS33A-205ENST00000541169 PCDHB5Q9Y5E4 795 aa20.05■□□□□ 0.8
VPS33A-205ENST00000541169 SLC34A2O95436 690 aa20.04■□□□□ 0.8
VPS33A-205ENST00000541169 C8AP07357 584 aa20.04■□□□□ 0.8
VPS33A-205ENST00000541169 MTHFRP42898 656 aa20.04■□□□□ 0.8
VPS33A-205ENST00000541169 GCNT1Q02742 428 aa20.04■□□□□ 0.8
VPS33A-205ENST00000541169 EXOC3L4Q17RC7 722 aa20.04■□□□□ 0.8
VPS33A-205ENST00000541169 CFAP221Q4G0U5 840 aa20.04■□□□□ 0.8
VPS33A-205ENST00000541169 SLC39A12Q504Y0 691 aa20.04■□□□□ 0.8
VPS33A-205ENST00000541169 ATAT1Q5SQI0 421 aa20.04■□□□□ 0.8
VPS33A-205ENST00000541169 FAM171BQ6P995 826 aa20.04■□□□□ 0.8
VPS33A-205ENST00000541169 SYCE2Q6PIF2 218 aa20.04■□□□□ 0.8
VPS33A-205ENST00000541169 RNF19BQ6ZMZ0 732 aa20.04■□□□□ 0.8
VPS33A-205ENST00000541169 ELMOD1Q8N336 334 aa20.04■□□□□ 0.8
VPS33A-205ENST00000541169 AOPEPQ8N6M6 819 aa20.04■□□□□ 0.8
VPS33A-205ENST00000541169 CYP4F11Q9HBI6 524 aa20.04■□□□□ 0.8
VPS33A-205ENST00000541169 APOBEC3GQ9HC16 384 aaKnown RBP20.04■□□□□ 0.8
VPS33A-205ENST00000541169 POLIQ9UNA4 740 aa20.04■□□□□ 0.8
VPS33A-205ENST00000541169 MTMR11A4FU01 709 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 LRG1P02750 347 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 ZNF18P17022 549 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 CUL2Q13617 745 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 NCAPHQ15003 741 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 FKBP15Q5T1M5 1219 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 SPOPLQ6IQ16 392 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 GPR149Q86SP6 731 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 CRYBG2Q8N1P7 616 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 LMO3Q8TAP4 145 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 SLC7A14Q8TBB6 771 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 MYCBPAPQ8TBZ2 947 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 MRPL45Q9BRJ2 306 aaKnown RBP20.03■□□□□ 0.8
VPS33A-205ENST00000541169 NT5C1AQ9BXI3 368 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 PRKD2Q9BZL6 878 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 S1PR5Q9H228 398 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 SMYD3Q9H7B4 428 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 GCNT4Q9P109 453 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 LIMA1Q9UHB6 759 aaKnown RBP20.03■□□□□ 0.8
VPS33A-205ENST00000541169 DAAM1Q9Y4D1 1078 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 ASB3Q9Y575 518 aa20.03■□□□□ 0.8
VPS33A-205ENST00000541169 ATP8B3O60423 1300 aa20.02■□□□□ 0.8
VPS33A-205ENST00000541169 CCDC195A0A1B0GUA6 201 aa20.02■□□□□ 0.8
VPS33A-205ENST00000541169 PTPN1P18031 435 aaKnown RBP20.02■□□□□ 0.8
VPS33A-205ENST00000541169 RFX1P22670 979 aa20.02■□□□□ 0.8
VPS33A-205ENST00000541169 MAGEA11P43364 429 aa20.02■□□□□ 0.8
VPS33A-205ENST00000541169 ALDH1A3P47895 512 aa20.02■□□□□ 0.8
VPS33A-205ENST00000541169 DLX2Q07687 328 aaPredicted RBP20.02■□□□□ 0.8
VPS33A-205ENST00000541169 MIIPQ5JXC2 388 aa20.02■□□□□ 0.8
VPS33A-205ENST00000541169 VSTM1Q6UX27 236 aa20.02■□□□□ 0.8
VPS33A-205ENST00000541169 OSTM1Q86WC4 334 aa20.02■□□□□ 0.8
VPS33A-205ENST00000541169 SPATA2LQ8IUW3 424 aaPredicted RBP20.02■□□□□ 0.8
VPS33A-205ENST00000541169 DHX40Q8IX18 779 aaKnown RBP20.02■□□□□ 0.8
VPS33A-205ENST00000541169 LEMD2Q8NC56 503 aa20.02■□□□□ 0.8
VPS33A-205ENST00000541169 B3GALNT2Q8NCR0 500 aa20.02■□□□□ 0.8
VPS33A-205ENST00000541169 PKMYT1Q99640 499 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms