RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PTP4A2Q12974 167 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 GRIK3Q13003 919 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 MKRN3Q13064 507 aaKnown RBP10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 ACVR2BQ13705 512 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 CTC1Q2NKJ3 1217 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 CDR2LQ86X02 465 aaPredicted RBP10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 CCDC33Q8N5R6 958 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 PPP1R12CQ9BZL4 782 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 EHMT1Q9H9B1 1298 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 SERPINA10Q9UK55 444 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 CST3P01034 146 aaPredicted RBP10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 BGNP21810 368 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 GTF2H1P32780 548 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 PGM5Q15124 567 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 ACSBG2Q5FVE4 666 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 RNASEH2BQ5TBB1 312 aaKnown RBP10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 RINLQ6ZS11 566 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 C3orf62Q6ZUJ4 267 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 ALYREFQ86V81 257 aaKnown RBP10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 KATNAL2Q8IYT4 538 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 ALLCQ8N6M5 410 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 PAFAH2Q99487 392 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 DLGAP2Q9P1A6 1054 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 PCSK1NQ9UHG2 260 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 UBIAD1Q9Y5Z9 338 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 WEE2P0C1S8 567 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 KITP10721 976 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 NEFHP12036 1026 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 TNFSF9P41273 254 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 LIG4P49917 911 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 MUM1Q2TAK8 710 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 WDR44Q5JSH3 913 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 FAXCQ5TGI0 409 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 TMEM154Q6P9G4 183 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 SPOCD1Q6ZMY3 1216 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 CCDC60Q8IWA6 550 aaPredicted RBP10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 SCYL3Q8IZE3 742 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 FBXO36Q8NEA4 188 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 FAM111AQ96PZ2 611 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 TARS2Q9BW92 718 aaKnown RBP10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 AVENQ9NQS1 362 aaPredicted RBP10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 COL11A2P13942 1736 aaPredicted RBP10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 AP1G2O75843 785 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 IL1R2P27930 398 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 GCNT1Q02742 428 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 CAV1Q03135 178 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 CUL2Q13617 745 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 SGSM1Q2NKQ1 1148 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 DCUN1D2Q6PH85 259 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 NPNTQ6UXI9 565 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 ISLR2Q6UXK2 745 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZBTB33Q86T24 672 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 KBTBD2Q8IY47 623 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 ABRAQ8N0Z2 381 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 OGFOD1Q8N543 542 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 SLC25A41Q8N5S1 370 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 FEZF2Q8TBJ5 459 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 ACTL9Q8TC94 416 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 ASAP3Q8TDY4 903 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 SERAC1Q96JX3 654 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 POLR3FQ9H1D9 316 aaPredicted RBP10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZNF70Q9UC06 446 aaPredicted RBP10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 RABGEF1Q9UJ41 708 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 FAM237BA0A1B0GVD1 139 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 ICAM1P05362 532 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 AMPD1P23109 780 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 SLC1A1P43005 524 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 INHBEP58166 350 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 OTUD4Q01804 1114 aaKnown RBP10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 SEPT7Q16181 437 aaKnown RBP10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 CCDC6Q16204 474 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 HIF1AQ16665 826 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 CDHR3Q6ZTQ4 885 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 SYDE1Q6ZW31 735 aaPredicted RBP10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 UNC45BQ8IWX7 931 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 KIAA0319LQ8IZA0 1049 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 AGGF1Q8N302 714 aaeCLIP10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZNF276Q8N554 614 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 FAM71DQ8N9W8 422 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 ARMC2Q8NEN0 867 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 EXD1Q8NHP7 514 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 PYROXD1Q8WU10 500 aa10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 GJD4Q96KN9 370 aaPredicted RBP10.9□□□□□ -0.66
CDC42SE1-207ENST00000540998 CNTNAP1P78357 1384 aa10.9□□□□□ -0.67
CDC42SE1-207ENST00000540998 SPDYE2BA6NHP3 402 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 A6NHS1 94 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 LRRIQ4A6NIV6 560 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 F5H423 210 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 PSTPIP1O43586 416 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 SPDYE6P0CI01 402 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 ALDH1B1P30837 517 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 MAN1A1P33908 653 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 CETN2P41208 172 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 BASP1P80723 227 aaKnown RBP10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 ZBTB16Q05516 673 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 CCDC15Q0P6D6 951 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 ZACNQ401N2 412 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 LIN9Q5TKA1 542 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 CES4AQ5XG92 561 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms