RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 UMODL1Q5DID0 1318 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 KIAA0391O15091 583 aaKnown RBP10.04□□□□□ -0.8
TTC39C-203ENST00000540918 TREHO43280 583 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 EIF4BP23588 611 aaKnown RBP10.04□□□□□ -0.8
TTC39C-203ENST00000540918 KCNJ6P48051 423 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 TPI1P60174 286 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 PTGISQ16647 500 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 FBXO47Q5MNV8 452 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 TTC30AQ86WT1 665 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 OR6P1Q8NGX9 317 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 PPP4R1Q8TF05 950 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 DEPDC1BQ8WUY9 529 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 BRI3BPQ8WY22 251 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 CDKL2Q92772 493 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 RBM15Q96T37 977 aaKnown RBP eCLIP10.04□□□□□ -0.8
TTC39C-203ENST00000540918 CCDC68Q9H2F9 335 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 VTA1Q9NP79 307 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 UBP1Q9NZI7 540 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 CAPN7Q9Y6W3 813 aa10.04□□□□□ -0.8
TTC39C-203ENST00000540918 M0R2N6 131 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 PRRG1O14668 218 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 GIPC1O14908 333 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 SMIM10L2AP0DMW4 78 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 SMIM10L2BP0DMW5 78 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 MAPTP10636 758 aaKnown RBP10.03□□□□□ -0.8
TTC39C-203ENST00000540918 PYGMP11217 842 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 ARF4P18085 180 aaPredicted RBP10.03□□□□□ -0.8
TTC39C-203ENST00000540918 GTF2BQ00403 316 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 BYSLQ13895 437 aaKnown RBP10.03□□□□□ -0.8
TTC39C-203ENST00000540918 PRPSAP1Q14558 356 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 GTF3C2Q8WUA4 911 aaPredicted RBP10.03□□□□□ -0.8
TTC39C-203ENST00000540918 RXFP2Q8WXD0 754 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 CCT6BQ92526 530 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 BAP1Q92560 729 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 GPR20Q99678 358 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 FSD1LQ9BXM9 530 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 KLC2Q9H0B6 622 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 SARS2Q9NP81 518 aaKnown RBP10.03□□□□□ -0.8
TTC39C-203ENST00000540918 CICQ96RK0 1608 aaPredicted RBP10.03□□□□□ -0.8
TTC39C-203ENST00000540918 CD4P01730 458 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 EPHB2P29323 1055 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 RABGGTBP53611 331 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 CDK17Q00537 523 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 FIGNQ5HY92 759 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 SDCCAG8Q86SQ7 713 aaPredicted RBP10.03□□□□□ -0.8
TTC39C-203ENST00000540918 ADGRF2Q8IZF7 708 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 ATL2Q8NHH9 583 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 FBXO25Q8TCJ0 367 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 SLC2A14Q8TDB8 520 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 C18orf25Q96B23 403 aaPredicted RBP10.03□□□□□ -0.8
TTC39C-203ENST00000540918 FAM136AQ96C01 138 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 PGBD4Q96DM1 585 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 CFAP57Q96MR6 1250 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 IFT122Q9HBG6 1241 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 PFDN4Q9NQP4 134 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 REXO2Q9Y3B8 237 aaKnown RBP10.03□□□□□ -0.8
TTC39C-203ENST00000540918 KDM3BQ7LBC6 1761 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 SPTLC1O15269 473 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 P4HA2O15460 535 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 TLR2O60603 784 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 STAMBPO95630 424 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 FAM200BP0CF97 657 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 BRAFP15056 766 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 ARL4CP56559 192 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 SDHAF4Q5VUM1 108 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 CEP128Q6ZU80 1094 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 TMC2Q8TDI7 906 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 EPS8L1Q8TE68 723 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 ALKBH8Q96BT7 664 aaKnown RBP10.03□□□□□ -0.8
TTC39C-203ENST00000540918 HVCN1Q96D96 273 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 TMEM176AQ96HP8 235 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 PPP1R36Q96LQ0 422 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 RMDN2Q96LZ7 410 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 XPNPEP1Q9NQW7 623 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 AIPL1Q9NZN9 384 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 DCTN4Q9UJW0 460 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 ALS2Q96Q42 1657 aa10.03□□□□□ -0.8
TTC39C-203ENST00000540918 TYW5A2RUC4 315 aaKnown RBP10.02□□□□□ -0.8
TTC39C-203ENST00000540918 CD52P31358 61 aa10.02□□□□□ -0.8
TTC39C-203ENST00000540918 SLC26A2P50443 739 aa10.02□□□□□ -0.8
TTC39C-203ENST00000540918 ITGA8P53708 1063 aa10.02□□□□□ -0.8
TTC39C-203ENST00000540918 MAP2K5Q13163 448 aa10.02□□□□□ -0.8
TTC39C-203ENST00000540918 SLC29A2Q14542 456 aa10.02□□□□□ -0.8
TTC39C-203ENST00000540918 C15orf59Q2T9L4 293 aaPredicted RBP10.02□□□□□ -0.8
TTC39C-203ENST00000540918 ZNF449Q6P9G9 518 aa10.02□□□□□ -0.8
TTC39C-203ENST00000540918 LRRC31Q6UY01 552 aa10.02□□□□□ -0.8
TTC39C-203ENST00000540918 SLC13A5Q86YT5 568 aaPredicted RBP10.02□□□□□ -0.8
TTC39C-203ENST00000540918 TTC30BQ8N4P2 665 aa10.02□□□□□ -0.8
TTC39C-203ENST00000540918 GSDMBQ8TAX9 411 aa10.02□□□□□ -0.8
TTC39C-203ENST00000540918 LNX1Q8TBB1 728 aaPredicted RBP10.02□□□□□ -0.8
TTC39C-203ENST00000540918 GPR152Q8TDT2 470 aa10.02□□□□□ -0.8
TTC39C-203ENST00000540918 FAM172AQ8WUF8 416 aa10.02□□□□□ -0.8
TTC39C-203ENST00000540918 ZSWIM1Q9BR11 485 aa10.02□□□□□ -0.8
TTC39C-203ENST00000540918 PLEKHA5Q9HAU0 1116 aa10.02□□□□□ -0.8
TTC39C-203ENST00000540918 DDX43Q9NXZ2 648 aaKnown RBP10.02□□□□□ -0.8
TTC39C-203ENST00000540918 KLHL14Q9P2G3 628 aa10.02□□□□□ -0.8
TTC39C-203ENST00000540918 APOL1O14791 398 aa10.02□□□□□ -0.81
TTC39C-203ENST00000540918 ZNF263O14978 683 aa10.02□□□□□ -0.81
TTC39C-203ENST00000540918 MYBL1P10243 752 aa10.02□□□□□ -0.81
TTC39C-203ENST00000540918 GPD1P21695 349 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms