RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 SLC35G2Q8TBE7 412 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 DPF3Q92784 378 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 RPS6KC1Q96S38 1066 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 NIF3L1Q9GZT8 377 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 VRTNQ9H8Y1 702 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 ANKZF1Q9H8Y5 726 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 TBC1D13Q9NVG8 400 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 CXXC1Q9P0U4 656 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-204ENST00000540846 CACNG4Q9UBN1 327 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 RNF14Q9UBS8 474 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 INPP5FQ9Y2H2 1132 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 STXBP5LQ9Y2K9 1186 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 PCDHB7Q9Y5E2 793 aa13.29□□□□□ -0.28
SMAD3-204ENST00000540846 DDHD2O94830 711 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 KIF4AO95239 1232 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 STAU1O95793 577 aaKnown RBP13.28□□□□□ -0.28
SMAD3-204ENST00000540846 POMCP01189 267 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 FGBP02675 491 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 GPC5P78333 572 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 TRPC3Q13507 836 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 RPS6KA1Q15418 735 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 CLEC16AQ2KHT3 1053 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 PSRC1Q6PGN9 363 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-204ENST00000540846 ZNF280BQ86YH2 543 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 RBBP8NLQ8NC74 664 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-204ENST00000540846 HERVK_113Q902F9 699 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 TAF4BQ92750 862 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 ZNF689Q96CS4 500 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-204ENST00000540846 FAXDC2Q96IV6 333 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 PAAF1Q9BRP4 392 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 ABCB6Q9NP58 842 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 OSGEPQ9NPF4 335 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 SLC38A7Q9NVC3 462 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 HCSTQ9UBK5 93 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 GTF3C4Q9UKN8 822 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 XPOTO43592 962 aaKnown RBP13.28□□□□□ -0.28
SMAD3-204ENST00000540846 BUB1BO60566 1050 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-204ENST00000540846 CXCR5P32302 372 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 TUSC3Q13454 348 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 ZNF699Q32M78 642 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 ACAD10Q6JQN1 1059 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 C11orf63Q6NUN7 778 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 TMEM270Q6UE05 265 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 CD300LGQ6UXG3 332 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 TRIM72Q6ZMU5 477 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 NT5DC3Q86UY8 548 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 LRRC52Q8N7C0 313 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 C3orf58Q8NDZ4 430 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 PSMB7Q99436 277 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 ARGLU1Q9NWB6 273 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-204ENST00000540846 PACSIN2Q9UNF0 486 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-204ENST00000540846 COG5Q9UP83 839 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 AGAP1Q9UPQ3 857 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 PCDHB4Q9Y5E5 795 aa13.28□□□□□ -0.28
SMAD3-204ENST00000540846 VWA8A3KMH1 1905 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 SPTLC1O15269 473 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 HOXA2O43364 376 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 AMHP03971 560 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 CYP1A1P04798 512 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-204ENST00000540846 CYP1A2P05177 515 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 UNGP13051 313 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-204ENST00000540846 RBP5P82980 135 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 UPP1Q16831 310 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 CCDC181Q5TID7 509 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 PEX26Q7Z412 305 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 DAAM2Q86T65 1068 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 COLGALT2Q8IYK4 626 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 RSPH1Q8WYR4 309 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 HES6Q96HZ4 224 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 PARD6BQ9BYG5 372 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 EPC1Q9H2F5 836 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 GOLPH3Q9H4A6 298 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 RNF216Q9NWF9 866 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-204ENST00000540846 DNAJB4Q9UDY4 337 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 LRFN2Q9ULH4 789 aa13.27□□□□□ -0.29
SMAD3-204ENST00000540846 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-204ENST00000540846 NLRC5Q86WI3 1866 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 CASTOR2A6NHX0 329 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 UPP2O95045 317 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 CALCAP01258 141 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 TUBBP07437 444 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 KRT19P08727 400 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 GNA15P30679 374 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 ATICP31939 592 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 PAFAH1B1P43034 410 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 MAGEA10P43363 369 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-204ENST00000540846 ASPAP45381 313 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 CLCN6P51797 869 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 CLCNKBP51801 687 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 YWHAEP62258 255 aaKnown RBP13.26□□□□□ -0.29
SMAD3-204ENST00000540846 CENPCQ03188 943 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 CFAP221Q4G0U5 840 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 PPP1R2P3Q6NXS1 205 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 LIMS2Q7Z4I7 341 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 MMGT1Q8N4V1 131 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 SPATA4Q8NEY3 305 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 URGCPQ8TCY9 931 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 UBE2Q2Q8WVN8 375 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 ZNF653Q96CK0 615 aa13.26□□□□□ -0.29
SMAD3-204ENST00000540846 TRIM11Q96F44 468 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms