RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 PUF60Q9UHX1 559 aaKnown RBP15.16■□□□□ 0.02
CYB561A3-216ENST00000540755 PCDHGC5Q9Y5F6 944 aa15.16■□□□□ 0.02
CYB561A3-216ENST00000540755 GBF1Q92538 1859 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 MED7O43513 233 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 BUB1O43683 1085 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 LSM8O95777 96 aaKnown RBP15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 CXCL10P02778 98 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 FAM163BP0C2L3 166 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 FOSL2P15408 326 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 ABCB4P21439 1286 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 BRD2P25440 801 aaKnown RBP15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 RPL9P32969 192 aaKnown RBP15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 AFF1P51825 1210 aaKnown RBP15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 NAP1L1P55209 391 aaKnown RBP15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 LILRA4P59901 499 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 NOMO3P69849 1222 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 GPC5P78333 572 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 TUBB2AQ13885 445 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 PSRC1Q6PGN9 363 aaPredicted RBP15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 DPH6Q7L8W6 267 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 RHOT2Q8IXI1 618 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 SLC4A11Q8NBS3 891 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 RNF169Q8NCN4 708 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 TWNKQ96RR1 684 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 TUBB2BQ9BVA1 445 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 COL25A1Q9BXS0 654 aaPredicted RBP15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 PBX4Q9BYU1 374 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 ELOVL4Q9GZR5 314 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 THAP2Q9H0W7 228 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 ELAC1Q9H777 363 aaKnown RBP15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 L2HGDHQ9H9P8 463 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 IL23AQ9NPF7 189 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 KIAA1257Q9ULG3 409 aa15.15■□□□□ 0.02
CYB561A3-216ENST00000540755 SPTLC1O15269 473 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 VDRP11473 427 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 CDH5P33151 784 aaPredicted RBP15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 NSFP46459 744 aaKnown RBP15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 NDST1P52848 882 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 HADHBP55084 474 aaKnown RBP15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 SOWAHAQ2M3V2 549 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 UNC93AQ86WB7 457 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 TOP6BLQ8N6T0 577 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 DBF4BQ8NFT6 615 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 TET1Q8NFU7 2136 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 HERVK_113Q902F9 699 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 TFAP2BQ92481 460 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 TIFAQ96CG3 184 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 CYFIP2Q96F07 1278 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 TRIM11Q96F44 468 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 DDX27Q96GQ7 796 aaKnown RBP15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 ZSWIM1Q9BR11 485 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 MRPL45Q9BRJ2 306 aaKnown RBP15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 NT5C1AQ9BXI3 368 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 ZNF518BQ9C0D4 1074 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 TMEM161AQ9NX61 479 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 HMGXB4Q9UGU5 601 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 GTF3C4Q9UKN8 822 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 JRKLQ9Y4A0 524 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 MICAL3Q7RTP6 2002 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 MYO9BQ13459 2157 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 PODXLO00592 558 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 DYNC1I1O14576 645 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 URI1O94763 535 aaPredicted RBP15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 CFHP08603 1231 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 MYBL1P10243 752 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 PAX3P23760 479 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 NOP2P46087 812 aaKnown RBP15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 CCL23P55773 120 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 NAA35Q5VZE5 725 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 PHF13Q86YI8 300 aaPredicted RBP15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 ARHGEF26Q96DR7 871 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 VCPIP1Q96JH7 1222 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 UROC1Q96N76 676 aa15.14■□□□□ 0.01
CYB561A3-216ENST00000540755 MUC3AQ02505 3323 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 TTC3P53804 2025 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 GRID2IPA4D2P6 1211 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 ENPP3O14638 875 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 HUS1O60921 280 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 PALMO75781 387 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 MTA2O94776 668 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 CYP1A2P05177 515 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 CD19P15391 556 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 CLCNKBP51801 687 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 TUSC3Q13454 348 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 STILQ15468 1287 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 UPP1Q16831 310 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 PAPD7Q5XG87 772 aaKnown RBP15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 GLB1LQ6UWU2 654 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 MON1BQ7L1V2 547 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 MCOLN2Q8IZK6 566 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 TMEM35BQ8NCS4 154 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 APPL2Q8NEU8 664 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 TPCN2Q8NHX9 752 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 SLC35G2Q8TBE7 412 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 KBTBD7Q8WVZ9 684 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 CPA5Q8WXQ8 436 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 ZNF653Q96CK0 615 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 LHX5Q9H2C1 402 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 ZNF576Q9H609 170 aa15.13■□□□□ 0.01
CYB561A3-216ENST00000540755 AVENQ9NQS1 362 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms