RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 LARGE2Q8N3Y3 721 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 LINC00116Q8NCU8 138 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 B4GALNT2Q8NHY0 566 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 EPS8L1Q8TE68 723 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 NRBF2Q96F24 287 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 NGRNQ9NPE2 291 aaKnown RBP13.63□□□□□ -0.23
DNMT1-203ENST00000540357 RAB6BQ9NRW1 208 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 HERC5Q9UII4 1024 aaKnown RBP13.63□□□□□ -0.23
DNMT1-203ENST00000540357 FCHO1O14526 889 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 RGL2O15211 777 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 ZFXP17010 805 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-203ENST00000540357 ADRA2BP18089 450 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 TYK2P29597 1187 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 RFC1P35251 1148 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-203ENST00000540357 MARCKSL1P49006 195 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 VCPP55072 806 aaKnown RBP13.63□□□□□ -0.23
DNMT1-203ENST00000540357 AP1B1Q10567 949 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 LBRQ14739 615 aaKnown RBP13.63□□□□□ -0.23
DNMT1-203ENST00000540357 THNSL1Q8IYQ7 743 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 ZNF317Q96PQ6 595 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-203ENST00000540357 POP1Q99575 1024 aaKnown RBP13.63□□□□□ -0.23
DNMT1-203ENST00000540357 PI4K2AQ9BTU6 479 aa13.63□□□□□ -0.23
DNMT1-203ENST00000540357 M0R2N6 131 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 KCNN4O15554 427 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 KRT10P13645 584 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 NFIXQ14938 502 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 NFIL3Q16649 462 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 EFHC1Q5JVL4 640 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 THEMIS2Q5TEJ8 643 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 LCA5Q86VQ0 697 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 SSX2IPQ9Y2D8 614 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 DTNAQ9Y4J8 743 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 SLC4A7Q9Y6M7 1214 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 ARFGEF2Q9Y6D5 1785 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 A8MUI8 341 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 C2CD2LO14523 706 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 ADCY3O60266 1144 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 BGNP21810 368 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 GPC3P51654 580 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 PPATQ06203 517 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 CUL2Q13617 745 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 C1orf228Q6PIY5 440 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 KATNAL2Q8IYT4 538 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 VCPIP1Q96JH7 1222 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 RPF1Q9H9Y2 349 aaKnown RBP13.62□□□□□ -0.23
DNMT1-203ENST00000540357 SLC38A10Q9HBR0 1119 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 ZDHHC18Q9NUE0 388 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 CHCHD3Q9NX63 227 aaKnown RBP13.62□□□□□ -0.23
DNMT1-203ENST00000540357 RPTORQ8N122 1335 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 CLRN2A0PK11 232 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 ENTPD5O75356 428 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 SLITRK3O94933 977 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 PYGBP11216 843 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 PPP6R3Q5H9R7 873 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-203ENST00000540357 OLFML2BQ68BL8 750 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 HEATR6Q6AI08 1181 aaKnown RBP13.62□□□□□ -0.23
DNMT1-203ENST00000540357 GRAMD4Q6IC98 578 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 SLC9A9Q8IVB4 645 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 NLGN1Q8N2Q7 840 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 SDCCAG3Q96C92 435 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 APOPT1Q96IL0 206 aa13.62□□□□□ -0.23
DNMT1-203ENST00000540357 NR1H4Q96RI1 486 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-203ENST00000540357 ZC3H4Q9UPT8 1303 aaKnown RBP13.62□□□□□ -0.23
DNMT1-203ENST00000540357 FAM86B1E9PN63 330 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 EDF1O60869 148 aaKnown RBP13.61□□□□□ -0.23
DNMT1-203ENST00000540357 FAM86B2P0C5J1 330 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 RBP3P10745 1247 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 PTGIRP43119 386 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 SLC26A11Q86WA9 606 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 NDUFAF2Q8N183 169 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 FAM13CQ8NE31 585 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 ETNPPLQ8TBG4 499 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 SPATA18Q8TC71 538 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 METTL5Q9NRN9 209 aaKnown RBP13.61□□□□□ -0.23
DNMT1-203ENST00000540357 SETD1AO15047 1707 aaKnown RBP13.61□□□□□ -0.23
DNMT1-203ENST00000540357 TAC1P20366 129 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 NLRP11P59045 1033 aaKnown RBP13.61□□□□□ -0.23
DNMT1-203ENST00000540357 KCNA1Q09470 495 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 NCOA4Q13772 614 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 C3orf67Q6ZVT6 689 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 ECHDC2Q86YB7 292 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 JDP2Q8WYK2 163 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 SIKE1Q9BRV8 207 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 ASNSP08243 561 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 HADHBP55084 474 aaKnown RBP13.61□□□□□ -0.23
DNMT1-203ENST00000540357 GCNT1Q02742 428 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 EVX2Q03828 476 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 DUOXA2Q1HG44 320 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 ARSHQ5FYA8 562 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 C1orf186Q6ZWK4 172 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 FAM71DQ8N9W8 422 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 GMCL1P1Q8NEA9 526 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 PDZD8Q8NEN9 1154 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 SHISA4Q96DD7 197 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 GMCL1Q96IK5 515 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 IGSF9BQ9UPX0 1349 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 ZMYM2Q9UBW7 1377 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 AQP5P55064 265 aa13.61□□□□□ -0.23
DNMT1-203ENST00000540357 C1QBPQ07021 282 aaKnown RBP13.61□□□□□ -0.23
DNMT1-203ENST00000540357 SWSAP1Q6NVH7 229 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms