RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 Q8N9G6 341 aaPredicted RBP11.59□□□□□ -0.55
PBX1-212ENST00000540236 TGFBRAP1Q8WUH2 860 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 CPA5Q8WXQ8 436 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 DCUN1D1Q96GG9 259 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 ZFRQ96KR1 1074 aaKnown RBP11.59□□□□□ -0.55
PBX1-212ENST00000540236 TFCP2L1Q9NZI6 479 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 H7C0C1 242 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 DNALI1O14645 258 aaPredicted RBP11.59□□□□□ -0.55
PBX1-212ENST00000540236 PLA2G4BP0C869 781 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 ATP5OP48047 213 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 CDH15P55291 814 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 TPTEP56180 551 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 WASHC5Q12768 1159 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 JADE1Q6IE81 842 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 CROCCP3Q8IVE0 287 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 NKX2-3Q8TAU0 364 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 PRR11Q96HE9 360 aaPredicted RBP11.59□□□□□ -0.55
PBX1-212ENST00000540236 NDUFA13Q9P0J0 144 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 SEL1LQ9UBV2 794 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 CIDEBQ9UHD4 219 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 PCDHA12Q9UN75 941 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 DIS3Q9Y2L1 958 aaKnown RBP11.59□□□□□ -0.55
PBX1-212ENST00000540236 DISP1Q96F81 1524 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 GOLGA8TH3BQL2 631 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 TOR1BO14657 336 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 ZSCAN5DPP0CG00 497 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 NUP107P57740 925 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 SMUG1Q53HV7 270 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 SMYD1Q8NB12 490 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 KRT35Q92764 455 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 ZNF496Q96IT1 587 aaPredicted RBP11.59□□□□□ -0.55
PBX1-212ENST00000540236 PIGSQ96S52 555 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 WDR6Q9NNW5 1121 aaKnown RBP11.59□□□□□ -0.55
PBX1-212ENST00000540236 SLC17A7Q9P2U7 560 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 PCSK1NQ9UHG2 260 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 NAGPAQ9UK23 515 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 SYCE1LA8MT33 242 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 CBFA2T3O75081 653 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 S100A1P23297 94 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 SMARCA1P28370 1054 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 IST1P53990 364 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 TTLL12Q14166 644 aaPredicted RBP11.59□□□□□ -0.55
PBX1-212ENST00000540236 PDIA5Q14554 519 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 TAF5Q15542 800 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 SCYL2Q6P3W7 929 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 NET1Q7Z628 596 aaPredicted RBP11.59□□□□□ -0.55
PBX1-212ENST00000540236 CCDC33Q8N5R6 958 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 SLC20A1Q8WUM9 679 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 OXCT2Q9BYC2 517 aaPredicted RBP11.59□□□□□ -0.55
PBX1-212ENST00000540236 CCDC134Q9H6E4 229 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 PARVGQ9HBI0 331 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 CROTQ9UKG9 612 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 TCRBV7S2A1N4TA0A589 114 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 GJB6O95452 261 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 SOX5P35711 763 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 PRKG1Q13976 671 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 POLD3Q15054 466 aaPredicted RBP11.59□□□□□ -0.55
PBX1-212ENST00000540236 FAM214AQ32MH5 1076 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 CYP2R1Q6VVX0 501 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 KIAA0895Q8NCT3 520 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 BHLHE22Q8NFJ8 381 aaPredicted RBP11.59□□□□□ -0.55
PBX1-212ENST00000540236 TMEM117Q9H0C3 514 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 VPS11Q9H270 941 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 SMG5Q9UPR3 1016 aaKnown RBP11.59□□□□□ -0.55
PBX1-212ENST00000540236 USP20Q9Y2K6 914 aa11.59□□□□□ -0.55
PBX1-212ENST00000540236 KPNA4O00629 521 aaPredicted RBP11.58□□□□□ -0.56
PBX1-212ENST00000540236 IDH3BO43837 385 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 GABBR2O75899 941 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 TRIM16O95361 564 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 CCNB1P14635 433 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 MGAT5Q09328 741 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 BMPR2Q13873 1038 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 SLC1A5Q15758 541 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 METTL21CQ5VZV1 264 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 RPTORQ8N122 1335 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 LRRC47Q8N1G4 583 aaKnown RBP11.58□□□□□ -0.56
PBX1-212ENST00000540236 DCPSQ96C86 337 aaKnown RBP11.58□□□□□ -0.56
PBX1-212ENST00000540236 INTS2Q9H0H0 1204 aaKnown RBP11.58□□□□□ -0.56
PBX1-212ENST00000540236 GREM2Q9H772 168 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 SRRM3A6NNA2 597 aaPredicted RBP11.58□□□□□ -0.56
PBX1-212ENST00000540236 CCNT2O60583 730 aaKnown RBP11.58□□□□□ -0.56
PBX1-212ENST00000540236 SORBS2O94875 1100 aaKnown RBP11.58□□□□□ -0.56
PBX1-212ENST00000540236 GM2AP17900 193 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 IFNA8P32881 189 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 C11orf63Q6NUN7 778 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 PNMA1Q8ND90 353 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 PLBD2Q8NHP8 589 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 ELMO1Q92556 727 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 PRRG3Q9BZD7 231 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 REXO4Q9GZR2 422 aaKnown RBP11.58□□□□□ -0.56
PBX1-212ENST00000540236 PNMA8BQ9ULN7 279 aaPredicted RBP11.58□□□□□ -0.56
PBX1-212ENST00000540236 RFX7Q2KHR2 1363 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 POTEB3A0JP26 581 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 POTECB2RU33 542 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 FOXN3O00409 490 aaPredicted RBP11.58□□□□□ -0.56
PBX1-212ENST00000540236 MYBP10242 640 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 DARS2Q6PI48 645 aaKnown RBP11.58□□□□□ -0.56
PBX1-212ENST00000540236 POTEBQ6S5H4 581 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 NT5DC3Q86UY8 548 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 HPS6Q86YV9 775 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms