RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 NUMBLQ9Y6R0 609 aa16.17■□□□□ 0.18
UBE3B-212ENST00000540230 TMEM221A6NGB7 291 aa16.16■□□□□ 0.18
UBE3B-212ENST00000540230 M0R296 226 aa16.16■□□□□ 0.18
UBE3B-212ENST00000540230 SMC2O95347 1197 aa16.16■□□□□ 0.18
UBE3B-212ENST00000540230 PDGFBP01127 241 aaPredicted RBP16.16■□□□□ 0.18
UBE3B-212ENST00000540230 LMO2P25791 158 aa16.16■□□□□ 0.18
UBE3B-212ENST00000540230 BIRC3Q13489 604 aa16.16■□□□□ 0.18
UBE3B-212ENST00000540230 HTR4Q13639 388 aa16.16■□□□□ 0.18
UBE3B-212ENST00000540230 MGAT5BQ3V5L5 792 aa16.16■□□□□ 0.18
UBE3B-212ENST00000540230 INTS6LQ5JSJ4 861 aaKnown RBP16.16■□□□□ 0.18
UBE3B-212ENST00000540230 PARM1Q6UWI2 310 aa16.16■□□□□ 0.18
UBE3B-212ENST00000540230 TMC8Q8IU68 726 aa16.16■□□□□ 0.18
UBE3B-212ENST00000540230 STKLD1Q8NE28 680 aa16.16■□□□□ 0.18
UBE3B-212ENST00000540230 MCRS1Q96EZ8 462 aa16.16■□□□□ 0.18
UBE3B-212ENST00000540230 ZNF512Q96ME7 567 aaPredicted RBP16.16■□□□□ 0.18
UBE3B-212ENST00000540230 SEPT5Q99719 369 aaPredicted RBP16.16■□□□□ 0.18
UBE3B-212ENST00000540230 LPIN3Q9BQK8 851 aa16.16■□□□□ 0.18
UBE3B-212ENST00000540230 ACBD6Q9BR61 282 aa16.16■□□□□ 0.18
UBE3B-212ENST00000540230 MRPL45Q9BRJ2 306 aaKnown RBP16.16■□□□□ 0.18
UBE3B-212ENST00000540230 ZNF334Q9HCZ1 680 aaPredicted RBP16.16■□□□□ 0.18
UBE3B-212ENST00000540230 AVENQ9NQS1 362 aaPredicted RBP16.16■□□□□ 0.18
UBE3B-212ENST00000540230 GTF3C4Q9UKN8 822 aa16.16■□□□□ 0.18
UBE3B-212ENST00000540230 FRMD4BQ9Y2L6 1034 aa16.16■□□□□ 0.18
UBE3B-212ENST00000540230 TRIM49BA6NDI0 452 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 ANHXE9PGG2 379 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 ATP2C2O75185 946 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 TRIM49P0CI25 452 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 TRIM49CP0CI26 452 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 CD44P16070 742 aaKnown RBP16.15■□□□□ 0.18
UBE3B-212ENST00000540230 BMP6P22004 513 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 GPR15P49685 360 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 PSMC1P62191 440 aaKnown RBP16.15■□□□□ 0.18
UBE3B-212ENST00000540230 TSPY1Q01534 308 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 ADAM9Q13443 819 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 TDGQ13569 410 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 WDR72Q3MJ13 1102 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 COBLL1Q53SF7 1204 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 PDZD4Q76G19 769 aaPredicted RBP16.15■□□□□ 0.18
UBE3B-212ENST00000540230 DPH6Q7L8W6 267 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 ELOA2Q8IYF1 753 aaPredicted RBP16.15■□□□□ 0.18
UBE3B-212ENST00000540230 ELMOD1Q8N336 334 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 TMC2Q8TDI7 906 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 MMS19Q96T76 1030 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 IGSF9Q9P2J2 1179 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 DUSP12Q9UNI6 340 aa16.15■□□□□ 0.18
UBE3B-212ENST00000540230 MYBPHLA2RUH7 354 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 PHACTR2O75167 634 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 STAU1O95793 577 aaKnown RBP16.14■□□□□ 0.18
UBE3B-212ENST00000540230 HAPLN1P10915 354 aaPredicted RBP16.14■□□□□ 0.18
UBE3B-212ENST00000540230 MYL4P12829 197 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 COL9A1P20849 921 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 ALDH1A3P47895 512 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 LHX1P48742 406 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 VAMP7P51809 220 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 EPHA5P54756 1037 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 MYL7Q01449 175 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 TRPC3Q13507 836 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 NCOA4Q13772 614 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 EDRF1Q3B7T1 1238 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 ZACNQ401N2 412 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 IQCEQ6IPM2 695 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 SV2AQ7L0J3 742 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 FAM186BQ8IYM0 893 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 UBALD2Q8IYN6 164 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 DCP1BQ8IZD4 617 aaKnown RBP16.14■□□□□ 0.18
UBE3B-212ENST00000540230 ADSSL1Q8N142 457 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 SLC44A3Q8N4M1 653 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 SPATA18Q8TC71 538 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 SPPL2BQ8TCT7 592 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 GPR152Q8TDT2 470 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 PI4K2AQ9BTU6 479 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 ASAH2Q9NR71 780 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 HSFX1Q9UBD0 423 aa16.14■□□□□ 0.18
UBE3B-212ENST00000540230 NXF1Q9UBU9 619 aaKnown RBP16.14■□□□□ 0.18
UBE3B-212ENST00000540230 PTPRDP23468 1912 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 MAPK13O15264 365 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 PDGFRBP09619 1106 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 WARSP23381 471 aaKnown RBP16.14■□□□□ 0.17
UBE3B-212ENST00000540230 EPHB3P54753 998 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 UBE2HP62256 183 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 PPP3CAQ08209 521 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 PLD1Q13393 1074 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 SDHAF4Q5VUM1 108 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 ANKRD40Q6AI12 368 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 DNAJB7Q7Z6W7 309 aaPredicted RBP16.14■□□□□ 0.17
UBE3B-212ENST00000540230 SHKBP1Q8TBC3 707 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 GIPC2Q8TF65 315 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 PSMG2Q969U7 264 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 ZSWIM3Q96MP5 696 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 SYT15Q9BQS2 421 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 SDCBP2Q9H190 292 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 SMYD3Q9H7B4 428 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 VRTNQ9H8Y1 702 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 CRTAC1Q9NQ79 661 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 HOOK1Q9UJC3 728 aaKnown RBP16.14■□□□□ 0.17
UBE3B-212ENST00000540230 PCDHB5Q9Y5E4 795 aa16.14■□□□□ 0.17
UBE3B-212ENST00000540230 ZFP37Q9Y6Q3 630 aaPredicted RBP16.14■□□□□ 0.17
UBE3B-212ENST00000540230 ZNF318Q5VUA4 2279 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 A0A1W2PRU2 124 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 BIN1O00499 593 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms