RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 MFSD6LQ8IWD5 586 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 CCDC33Q8N5R6 958 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 POMGNT1Q8WZA1 660 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 ERCC4Q92889 916 aaPredicted RBP8.17□□□□□ -1.1
GNE-205ENST00000539815 LOXL4Q96JB6 756 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 ZNF396Q96N95 335 aaPredicted RBP8.17□□□□□ -1.1
GNE-205ENST00000539815 HEMK1Q9Y5R4 338 aaPredicted RBP8.17□□□□□ -1.1
GNE-205ENST00000539815 BACE2Q9Y5Z0 518 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 FRMPD4Q14CM0 1322 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 IGKV6D-21A0A0A0MT36 114 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 RIOK3O14730 519 aaKnown RBP8.17□□□□□ -1.1
GNE-205ENST00000539815 CYP11B2P19099 503 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 GRIK1P39086 918 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 NUCB2P80303 420 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 WDR45BQ5MNZ6 344 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 C4orf50Q6ZRC1 276 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 FAM160A2Q8N612 972 aaPredicted RBP8.17□□□□□ -1.1
GNE-205ENST00000539815 TATDN2Q93075 761 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 ARPC5LQ9BPX5 153 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 TUFT1Q9NNX1 390 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 MTRRQ9UBK8 725 aa8.17□□□□□ -1.1
GNE-205ENST00000539815 FLNBO75369 2602 aaKnown RBP8.17□□□□□ -1.1
GNE-205ENST00000539815 B4GALT5O43286 388 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 PSMD10O75832 226 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 CYBBP04839 570 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 USP17L7P0C7H9 530 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 TAF6P49848 677 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 SEC13P55735 322 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 CAPSQ13938 189 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 COL9A2Q14055 689 aaPredicted RBP8.16□□□□□ -1.1
GNE-205ENST00000539815 HNRNPDQ14103 355 aaKnown RBP8.16□□□□□ -1.1
GNE-205ENST00000539815 TEAD4Q15561 434 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 BMP2KLQ5H9B9 411 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 KRBA2Q6ZNG9 492 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 DNAJB7Q7Z6W7 309 aaPredicted RBP8.16□□□□□ -1.1
GNE-205ENST00000539815 CAMKK1Q8N5S9 505 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 FAXDC2Q96IV6 333 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 XPO6Q96QU8 1125 aaKnown RBP8.16□□□□□ -1.1
GNE-205ENST00000539815 DHX33Q9H6R0 707 aaKnown RBP8.16□□□□□ -1.1
GNE-205ENST00000539815 ZNF334Q9HCZ1 680 aaPredicted RBP8.16□□□□□ -1.1
GNE-205ENST00000539815 GPRC5CQ9NQ84 441 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 DNMT3BQ9UBC3 853 aaKnown RBP8.16□□□□□ -1.1
GNE-205ENST00000539815 FBXL5Q9UKA1 691 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 SLC16A4O15374 487 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 RNF40O75150 1001 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 MBL2P11226 248 aaPredicted RBP8.16□□□□□ -1.1
GNE-205ENST00000539815 CTHP32929 405 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 CLCNKBP51801 687 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 BIRC3Q13489 604 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 RUNX3Q13761 415 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 SETDB1Q15047 1291 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 FAM78AQ5JUQ0 283 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 TTC38Q5R3I4 469 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 SH3PXD2AQ5TCZ1 1133 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 LYSMD4Q5XG99 296 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 SLFN12LQ6IEE8 588 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 POTEDQ86YR6 584 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 SPPL2BQ8TCT7 592 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 ZFYVE19Q96K21 471 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 PLIN2Q99541 437 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 TRAIPQ9BWF2 469 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 G3BP2Q9UN86 482 aaKnown RBP8.16□□□□□ -1.1
GNE-205ENST00000539815 TYW5A2RUC4 315 aaKnown RBP8.16□□□□□ -1.1
GNE-205ENST00000539815 TMEM8BA6NDV4 472 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 POTEMA6NI47 508 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.16□□□□□ -1.1
GNE-205ENST00000539815 AP5Z1O43299 807 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 ATP4AP20648 1035 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 DMC1Q14565 340 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 SLC39A12Q504Y0 691 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 POTEGQ6S5H5 508 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 ATAD1Q8NBU5 361 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 NSUN7Q8NE18 718 aaKnown RBP8.16□□□□□ -1.1
GNE-205ENST00000539815 ATP2A3Q93084 1043 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 ZNF274Q96GC6 653 aaPredicted RBP8.16□□□□□ -1.1
GNE-205ENST00000539815 PDLIM2Q96JY6 352 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 EBF3Q9H4W6 596 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 POLD4Q9HCU8 107 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 ARHGEF4Q9NR80 690 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 DDX19AQ9NUU7 478 aaKnown RBP8.16□□□□□ -1.1
GNE-205ENST00000539815 EVA1BQ9NVM1 165 aa8.16□□□□□ -1.1
GNE-205ENST00000539815 WDR27A2RRH5 827 aa8.15□□□□□ -1.1
GNE-205ENST00000539815 ADH1CP00326 375 aa8.15□□□□□ -1.1
GNE-205ENST00000539815 C1RP00736 705 aa8.15□□□□□ -1.1
GNE-205ENST00000539815 PDIA3P30101 505 aaKnown RBP8.15□□□□□ -1.1
GNE-205ENST00000539815 CYP27A1Q02318 531 aa8.15□□□□□ -1.1
GNE-205ENST00000539815 RPL6Q02878 288 aaKnown RBP8.15□□□□□ -1.1
GNE-205ENST00000539815 SMARCB1Q12824 385 aa8.15□□□□□ -1.1
GNE-205ENST00000539815 USP4Q13107 963 aa8.15□□□□□ -1.1
GNE-205ENST00000539815 NAA30Q147X3 362 aaPredicted RBP8.15□□□□□ -1.1
GNE-205ENST00000539815 TMEM132DQ14C87 1099 aa8.15□□□□□ -1.1
GNE-205ENST00000539815 SV2CQ496J9 727 aa8.15□□□□□ -1.1
GNE-205ENST00000539815 N4BP2L1Q5TBK1 243 aaPredicted RBP8.15□□□□□ -1.1
GNE-205ENST00000539815 PHC3Q8NDX5 983 aa8.15□□□□□ -1.1
GNE-205ENST00000539815 KIF18AQ8NI77 898 aa8.15□□□□□ -1.1
GNE-205ENST00000539815 ASAP3Q8TDY4 903 aa8.15□□□□□ -1.1
GNE-205ENST00000539815 WHAMMQ8TF30 809 aa8.15□□□□□ -1.1
GNE-205ENST00000539815 CD101Q93033 1021 aa8.15□□□□□ -1.1
GNE-205ENST00000539815 LSG1Q9H089 658 aaKnown RBP8.15□□□□□ -1.1
GNE-205ENST00000539815 CABIN1Q9Y6J0 2220 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms