RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 SNX9Q9Y5X1 595 aa13.72□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 NCANO14594 1321 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 HEPACAM2A8MVW5 462 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 KIAA0391O15091 583 aaKnown RBP13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 TNNC2P02585 160 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 PSMC3P17980 439 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 NBL1P41271 181 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 CYP4F8P98187 520 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 ARHGAP15Q53QZ3 475 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 GPR158Q5T848 1215 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 ATL3Q6DD88 541 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 GAREM2Q75VX8 874 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 EPM2AIP1Q7L775 607 aaPredicted RBP13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 ASCL5Q7RTU5 278 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 CEP57L1Q8IYX8 460 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 LRRC52Q8N7C0 313 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 STKLD1Q8NE28 680 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 ZNF507Q8TCN5 953 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 SPPL2BQ8TCT7 592 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 GCNAQ96QF7 691 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 PI4K2AQ9BTU6 479 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 DDX23Q9BUQ8 820 aaKnown RBP13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 BCO2Q9BYV7 579 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 LTB4R2Q9NPC1 389 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 AGPAT3Q9NRZ7 376 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 INTS13Q9NVM9 706 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 DDX43Q9NXZ2 648 aaKnown RBP13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 SERTAD1Q9UHV2 236 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 NDRG2Q9UN36 371 aaKnown RBP13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 PCDHB5Q9Y5E4 795 aa13.71□□□□□ -0.21
TSPAN9-IT1-201ENST00000539784 DPYSL4O14531 572 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 ZNF263O14978 683 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 TGFB1I1O43294 461 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 HCRTO43612 131 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 PRPF40AO75400 957 aaKnown RBP13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 DLATP10515 647 aaKnown RBP13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 HAPLN1P10915 354 aaPredicted RBP13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 TARSP26639 723 aaKnown RBP13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 GPR15P49685 360 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 MYL7Q01449 175 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SMARCB1Q12824 385 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 MYO1EQ12965 1108 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SURF1Q15526 300 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SDHAF4Q5VUM1 108 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CNNM4Q6P4Q7 775 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 ZNF852Q6ZMS4 543 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 OSTM1Q86WC4 334 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 C1orf210Q8IVY1 113 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 YAF2Q8IY57 180 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 ADGRF2Q8IZF7 708 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CXorf38Q8TB03 319 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 C2orf15Q8WU43 125 aaKnown RBP13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 DEPDC1BQ8WUY9 529 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SCFD1Q8WVM8 642 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 DNASE1L2Q92874 299 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 IRF7Q92985 503 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 RSPRY1Q96DX4 576 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 GPR88Q9GZN0 384 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 KIAA1586Q9HCI6 787 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SPATA6Q9NWH7 488 aaPredicted RBP13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 HSFX1Q9UBD0 423 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 RCOR1Q9UKL0 485 aa13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 MAGED2Q9UNF1 606 aaPredicted RBP13.7□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 UBE4BO95155 1302 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 MIA3Q5JRA6 1907 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 A0A1B0GVL5 298 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 PRR23AA6NEV1 266 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 PROB1E7EW31 1015 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 FGF19O95750 216 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 TNNI1P19237 187 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SNRNP35Q16560 246 aaKnown RBP13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CCDC142Q17RM4 750 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 DUOXA2Q1HG44 320 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 INTS6LQ5JSJ4 861 aaKnown RBP13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 HS2ST1Q7LGA3 356 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 ARID3BQ8IVW6 561 aaPredicted RBP13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 MFSD6LQ8IWD5 586 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 TMEM86AQ8N2M4 240 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 NKD2Q969F2 451 aaPredicted RBP13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CCDC127Q96BQ5 260 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 HPDLQ96IR7 371 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SPATA32Q96LK8 384 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 FNBP1Q96RU3 617 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 TRPV4Q9HBA0 871 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 EXOC1Q9NV70 894 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 GDAP2Q9NXN4 497 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 GTF3C4Q9UKN8 822 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 R4GN57 208 aa13.69□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 PVALEFA0A1B0GWK0 134 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 ACTN4O43707 911 aaKnown RBP13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CLSTN1O94985 981 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SP9P0CG40 484 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 PFKFB1P16118 471 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CYP2F1P24903 491 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CDC25CP30307 473 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 CYP24A1Q07973 514 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 EHHADHQ08426 723 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 NFE2Q16621 373 aaPredicted RBP13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 DDR2Q16832 855 aa13.68□□□□□ -0.22
TSPAN9-IT1-201ENST00000539784 SOWAHAQ2M3V2 549 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms