RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ATF7P17544 494 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-209ENST00000539584 PDIA2Q13087 525 aaKnown RBP13.96□□□□□ -0.17
UBE3B-209ENST00000539584 GRM1Q13255 1194 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 ZFYVE27Q5T4F4 411 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 WDR78Q5VTH9 848 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 LVRNQ6Q4G3 990 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 MFSD7Q6UXD7 560 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 PAXIP1Q6ZW49 1069 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-209ENST00000539584 NLRP9Q7RTR0 991 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 OTOAQ7RTW8 1153 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 TMEM35BQ8NCS4 154 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 ARMC2Q8NEN0 867 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 PYROXD1Q8WU10 500 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 ZNF606Q8WXB4 792 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 AKT1S1Q96B36 256 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 SPDL1Q96EA4 605 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 ACSS3Q9H6R3 686 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 CYP26B1Q9NR63 512 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 STOML1Q9UBI4 398 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 STRIP2Q9ULQ0 834 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 ZMYND8Q9ULU4 1186 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-209ENST00000539584 CTDP1Q9Y5B0 961 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-209ENST00000539584 SNCAIPQ9Y6H5 919 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 TCRBV5S1A1TA0A578 114 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 TESPA1A2RU30 521 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-209ENST00000539584 A6NHS1 94 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 CLGNO14967 610 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 VNN1O95497 513 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 KRT4P19013 534 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 ATP6V1C1P21283 382 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 EIF4BP23588 611 aaKnown RBP13.95□□□□□ -0.18
UBE3B-209ENST00000539584 PAX7P23759 505 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 CDKN2BP42772 138 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 ADCY1Q08828 1119 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 CBLBQ13191 982 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 SLC1A5Q15758 541 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 XKR3Q5GH77 459 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 DNAJC24Q6P3W2 148 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 SAMD1Q6SPF0 538 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-209ENST00000539584 TAS1R3Q7RTX0 852 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 LONP2Q86WA8 852 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 ASAP3Q8TDY4 903 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 NUDCD1Q96RS6 583 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 ZNF341Q9BYN7 854 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 MMADHCQ9H3L0 296 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-209ENST00000539584 SLCO1B3Q9NPD5 702 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 RBAKQ9NYW8 714 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-209ENST00000539584 RABGEF1Q9UJ41 708 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 MTO1Q9Y2Z2 717 aaKnown RBP13.95□□□□□ -0.18
UBE3B-209ENST00000539584 CLRN2A0PK11 232 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 YDJCA8MPS7 323 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 ZNF862O60290 1169 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 SPAG6O75602 509 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 KRT7P08729 469 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 CDH5P33151 784 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-209ENST00000539584 NAMPTP43490 491 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 NOP14P78316 857 aaKnown RBP13.95□□□□□ -0.18
UBE3B-209ENST00000539584 ZRSR2Q15696 482 aaKnown RBP13.95□□□□□ -0.18
UBE3B-209ENST00000539584 WDR72Q3MJ13 1102 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 KAZNQ674X7 775 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 CIAPIN1Q6FI81 312 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 DCUN1D2Q6PH85 259 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 CLNKQ7Z7G1 428 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 CHSY1Q86X52 802 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 CPXCR1Q8N123 301 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 C4orf33Q8N1A6 199 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 GMLQ99445 158 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 TRIM55Q9BYV6 548 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 POLR3FQ9H1D9 316 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-209ENST00000539584 RAVER2Q9HCJ3 691 aaKnown RBP13.95□□□□□ -0.18
UBE3B-209ENST00000539584 XPNPEP1Q9NQW7 623 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 POLIQ9UNA4 740 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 IVNS1ABPQ9Y6Y0 642 aa13.95□□□□□ -0.18
UBE3B-209ENST00000539584 SGK1O00141 431 aa13.94□□□□□ -0.18
UBE3B-209ENST00000539584 KRT10P13645 584 aa13.94□□□□□ -0.18
UBE3B-209ENST00000539584 RAD23BP54727 409 aa13.94□□□□□ -0.18
UBE3B-209ENST00000539584 LBRQ14739 615 aaKnown RBP13.94□□□□□ -0.18
UBE3B-209ENST00000539584 TAF1BQ53T94 588 aaPredicted RBP13.94□□□□□ -0.18
UBE3B-209ENST00000539584 FAM91A1Q658Y4 838 aa13.94□□□□□ -0.18
UBE3B-209ENST00000539584 PHLDB2Q86SQ0 1253 aa13.94□□□□□ -0.18
UBE3B-209ENST00000539584 THNSL1Q8IYQ7 743 aa13.94□□□□□ -0.18
UBE3B-209ENST00000539584 UBR7Q8N806 425 aa13.94□□□□□ -0.18
UBE3B-209ENST00000539584 MICAL1Q8TDZ2 1067 aa13.94□□□□□ -0.18
UBE3B-209ENST00000539584 FNIP1Q8TF40 1166 aa13.94□□□□□ -0.18
UBE3B-209ENST00000539584 APBB2Q92870 758 aa13.94□□□□□ -0.18
UBE3B-209ENST00000539584 MAK16Q9BXY0 300 aaKnown RBP13.94□□□□□ -0.18
UBE3B-209ENST00000539584 APOBEC3GQ9HC16 384 aaKnown RBP13.94□□□□□ -0.18
UBE3B-209ENST00000539584 ZFATQ9P243 1243 aa13.94□□□□□ -0.18
UBE3B-209ENST00000539584 GRID1Q9ULK0 1009 aa13.94□□□□□ -0.18
UBE3B-209ENST00000539584 PCDHGC3Q9UN70 934 aa13.94□□□□□ -0.18
UBE3B-209ENST00000539584 IQANK1A0A1B0GTG1 560 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 FAM155BO75949 473 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 POLR2BP30876 1174 aaKnown RBP13.93□□□□□ -0.18
UBE3B-209ENST00000539584 GJC1P36383 396 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 NLRP11P59045 1033 aaKnown RBP13.93□□□□□ -0.18
UBE3B-209ENST00000539584 PLCB3Q01970 1234 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 GRIK3Q13003 919 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 KRT72Q14CN4 511 aa13.93□□□□□ -0.18
UBE3B-209ENST00000539584 FASTKD3Q14CZ7 662 aaKnown RBP13.93□□□□□ -0.18
UBE3B-209ENST00000539584 HADHQ16836 314 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms