RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 PTPRN2Q92932 1015 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 CEP170P1Q96L14 293 aa21.39■■□□□ 1.01
TMEM260-203ENST00000539559 ATP4AP20648 1035 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 CTCFP49711 727 aaPredicted RBP21.38■■□□□ 1.01
TMEM260-203ENST00000539559 WDR44Q5JSH3 913 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 ZBTB41Q5SVQ8 909 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 CLNKQ7Z7G1 428 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 C4orf19Q8IY42 314 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 ALLCQ8N6M5 410 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 ASAP3Q8TDY4 903 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 ZBTB10Q96DT7 871 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 LOXHD1Q8IVV2 1947 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 CLUHO75153 1309 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 POTEJP0CG39 1038 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 NRLP54845 237 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 NLRP11P59045 1033 aaKnown RBP21.38■■□□□ 1.01
TMEM260-203ENST00000539559 ZNF252P-AS1Q0IIN9 211 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 PTP4A2Q12974 167 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 RFX8Q6ZV50 586 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 TAS1R3Q7RTX0 852 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 LRRC6Q86X45 466 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 TCP10LQ8TDR4 215 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 FBXO6Q9NRD1 293 aaPredicted RBP21.38■■□□□ 1.01
TMEM260-203ENST00000539559 ARL8BQ9NVJ2 186 aa21.38■■□□□ 1.01
TMEM260-203ENST00000539559 SMG5Q9UPR3 1016 aaKnown RBP21.38■■□□□ 1.01
TMEM260-203ENST00000539559 LUC7L3O95232 432 aaKnown RBP21.37■■□□□ 1.01
TMEM260-203ENST00000539559 VNN1O95497 513 aa21.37■■□□□ 1.01
TMEM260-203ENST00000539559 ACO1P21399 889 aaKnown RBP21.37■■□□□ 1.01
TMEM260-203ENST00000539559 CAP2P40123 477 aa21.37■■□□□ 1.01
TMEM260-203ENST00000539559 OGDHQ02218 1023 aa21.37■■□□□ 1.01
TMEM260-203ENST00000539559 EAPPQ56P03 285 aaPredicted RBP21.37■■□□□ 1.01
TMEM260-203ENST00000539559 RNASEH2BQ5TBB1 312 aaKnown RBP21.37■■□□□ 1.01
TMEM260-203ENST00000539559 SPDYE1Q8NFV5 336 aaPredicted RBP21.37■■□□□ 1.01
TMEM260-203ENST00000539559 UCMAQ8WVF2 138 aa21.37■■□□□ 1.01
TMEM260-203ENST00000539559 TRIM11Q96F44 468 aa21.37■■□□□ 1.01
TMEM260-203ENST00000539559 ZBTB45Q96K62 511 aaPredicted RBP21.37■■□□□ 1.01
TMEM260-203ENST00000539559 SYT15Q9BQS2 421 aa21.37■■□□□ 1.01
TMEM260-203ENST00000539559 CYLDQ9NQC7 956 aa21.37■■□□□ 1.01
TMEM260-203ENST00000539559 GDF10P55107 478 aa21.37■■□□□ 1.01
TMEM260-203ENST00000539559 NR1H3Q13133 447 aa21.37■■□□□ 1.01
TMEM260-203ENST00000539559 CTC1Q2NKJ3 1217 aa21.37■■□□□ 1.01
TMEM260-203ENST00000539559 ZNF394Q53GI3 561 aa21.37■■□□□ 1.01
TMEM260-203ENST00000539559 FNBP1LQ5T0N5 605 aa21.37■■□□□ 1.01
TMEM260-203ENST00000539559 ABRAQ8N0Z2 381 aa21.37■■□□□ 1.01
TMEM260-203ENST00000539559 FEZF2Q8TBJ5 459 aa21.37■■□□□ 1.01
TMEM260-203ENST00000539559 MCEEQ96PE7 176 aa21.37■■□□□ 1.01
TMEM260-203ENST00000539559 FNBP1Q96RU3 617 aa21.37■■□□□ 1.01
TMEM260-203ENST00000539559 CADM1Q9BY67 442 aaKnown RBP21.37■■□□□ 1.01
TMEM260-203ENST00000539559 PSMC3IPQ9P2W1 217 aaPredicted RBP21.37■■□□□ 1.01
TMEM260-203ENST00000539559 LRRD1A4D1F6 860 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 CLGNO14967 610 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 ZNF862O60290 1169 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 GLRA2P23416 452 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 DTX3LQ8TDB6 740 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 SYTL5Q8TDW5 730 aaPredicted RBP21.36■■□□□ 1.01
TMEM260-203ENST00000539559 FER1L6Q2WGJ9 1857 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 KRT36O76013 467 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 LYPLA2O95372 231 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 ATP6V1C1P21283 382 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 RPS12P25398 132 aaKnown RBP21.36■■□□□ 1.01
TMEM260-203ENST00000539559 PTPN4P29074 926 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 SNRPFP62306 86 aaKnown RBP21.36■■□□□ 1.01
TMEM260-203ENST00000539559 SATB1Q01826 763 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 SEPT7Q16181 437 aaKnown RBP21.36■■□□□ 1.01
TMEM260-203ENST00000539559 SMTNL2Q2TAL5 461 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 PLEKHA7Q6IQ23 1121 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 RGS9BPQ6ZS82 235 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 TDRPQ86YL5 185 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 WDR83Q9BRX9 315 aaKnown RBP21.36■■□□□ 1.01
TMEM260-203ENST00000539559 MRPL47Q9HD33 250 aaKnown RBP21.36■■□□□ 1.01
TMEM260-203ENST00000539559 HEY2Q9UBP5 337 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 GABBR1Q9UBS5 961 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 PGAP2Q9UHJ9 254 aa21.36■■□□□ 1.01
TMEM260-203ENST00000539559 ZNF541Q9H0D2 1346 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 ALOX15BO15296 676 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 ZBED4O75132 1171 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 ICAM1P05362 532 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 MARK3P27448 753 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 RPS6P62753 249 aaKnown RBP21.35■■□□□ 1.01
TMEM260-203ENST00000539559 R3HDM1Q15032 1099 aaKnown RBP21.35■■□□□ 1.01
TMEM260-203ENST00000539559 MUM1Q2TAK8 710 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 GNPTABQ3T906 1256 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 SPOCD1Q6ZMY3 1216 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 C15orf39Q6ZRI6 1047 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 CENPUQ71F23 418 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 RBBP8NLQ8NC74 664 aaPredicted RBP21.35■■□□□ 1.01
TMEM260-203ENST00000539559 DNAJC9Q8WXX5 260 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 TTC25Q96NG3 672 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 MOV10L1Q9BXT6 1211 aaKnown RBP21.35■■□□□ 1.01
TMEM260-203ENST00000539559 PIDD1Q9HB75 910 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 RABGEF1Q9UJ41 708 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 TCRBV7S3A2A0A539 114 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 HARSP12081 509 aaKnown RBP21.35■■□□□ 1.01
TMEM260-203ENST00000539559 ZNF280AP59817 542 aaPredicted RBP21.35■■□□□ 1.01
TMEM260-203ENST00000539559 IRX1P78414 480 aaPredicted RBP21.35■■□□□ 1.01
TMEM260-203ENST00000539559 MAP3K10Q02779 954 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 ENOSF1Q7L5Y1 443 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 SENP7Q9BQF6 1050 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 NMRK1Q9NWW6 199 aa21.35■■□□□ 1.01
TMEM260-203ENST00000539559 TJP3O95049 919 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms