RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 CRTAC1Q9NQ79 661 aa13.91□□□□□ -0.18
CCDC42-202ENST00000539522 GCNT4Q9P109 453 aa13.91□□□□□ -0.18
CCDC42-202ENST00000539522 MAGEC2Q9UBF1 373 aaPredicted RBP13.91□□□□□ -0.18
CCDC42-202ENST00000539522 STK39Q9UEW8 545 aa13.91□□□□□ -0.18
CCDC42-202ENST00000539522 STXBP5LQ9Y2K9 1186 aa13.91□□□□□ -0.18
CCDC42-202ENST00000539522 HCFC2Q9Y5Z7 792 aa13.91□□□□□ -0.18
CCDC42-202ENST00000539522 NOTCH4Q99466 2003 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 A0A1B0GTH6 734 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 RNF225M0QZC1 329 aaPredicted RBP13.9□□□□□ -0.18
CCDC42-202ENST00000539522 TGM5O43548 720 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 HUS1O60921 280 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 N4BP1O75113 896 aaKnown RBP13.9□□□□□ -0.18
CCDC42-202ENST00000539522 TBX10O75333 385 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 SEC24AO95486 1093 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 SPATA31D3P0C874 917 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 UBASH3AP57075 661 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 ADAM15Q13444 863 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 CCDC85BQ15834 202 aaPredicted RBP13.9□□□□□ -0.18
CCDC42-202ENST00000539522 CTXN3Q4LDR2 81 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 KIAA1841Q6NSI8 718 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 RNF19BQ6ZMZ0 732 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 SPATA31D4Q6ZUB0 917 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 RRAGAQ7L523 313 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.9□□□□□ -0.18
CCDC42-202ENST00000539522 PALB2Q86YC2 1186 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 TTC9BQ8N6N2 239 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 APPL2Q8NEU8 664 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 MMS19Q96T76 1030 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 GAS2L1Q99501 681 aaPredicted RBP13.9□□□□□ -0.18
CCDC42-202ENST00000539522 NAA15Q9BXJ9 866 aaKnown RBP13.9□□□□□ -0.18
CCDC42-202ENST00000539522 ELOVL4Q9GZR5 314 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 GANQ9H2C0 597 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 RTN4Q9NQC3 1192 aaKnown RBP13.9□□□□□ -0.18
CCDC42-202ENST00000539522 PRDM6Q9NQX0 595 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 TMEM30AQ9NV96 361 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 DDX43Q9NXZ2 648 aaKnown RBP13.9□□□□□ -0.18
CCDC42-202ENST00000539522 CLEC1BQ9P126 229 aa13.9□□□□□ -0.18
CCDC42-202ENST00000539522 MYBPHLA2RUH7 354 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 CILPO75339 1184 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 CALCAP01258 141 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 TPM3P06753 285 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 PDGFRBP09619 1106 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 FAM163BP0C2L3 166 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 CDC25BP30305 580 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 PBX1P40424 430 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 NDUFV1P49821 464 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 PSMC1P62191 440 aaKnown RBP13.89□□□□□ -0.19
CCDC42-202ENST00000539522 TNNC1P63316 161 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 CUL2Q13617 745 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 NR1I3Q14994 352 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 FILIP1LQ4L180 1135 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 ZNF280DQ6N043 979 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 FAM171BQ6P995 826 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 TMEM184AQ6ZMB5 413 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 PAQR9Q6ZVX9 377 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 TMEM86AQ8N2M4 240 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 MICALL1Q8N3F8 863 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 EFHBQ8N7U6 833 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 ZSWIM1Q9BR11 485 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 RHOBTB2Q9BYZ6 727 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 IGFLR1Q9H665 355 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 TLE6Q9H808 572 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.89□□□□□ -0.19
CCDC42-202ENST00000539522 IFNKQ9P0W0 207 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 CDH22Q9UJ99 828 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 DSEQ9UL01 958 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 DOCK6Q96HP0 2047 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 GREB1Q4ZG55 1949 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 PATJQ8NI35 1801 aa13.89□□□□□ -0.19
CCDC42-202ENST00000539522 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.88□□□□□ -0.19
CCDC42-202ENST00000539522 PAPLNO95428 1278 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 CA8P35219 290 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 NDST1P52848 882 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 CACNA2D1P54289 1103 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 GPR17Q13304 367 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 EXOC3L4Q17RC7 722 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 INTS6LQ5JSJ4 861 aaKnown RBP13.88□□□□□ -0.19
CCDC42-202ENST00000539522 IQCEQ6IPM2 695 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 LLGL2Q6P1M3 1020 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 GBP6Q6ZN66 633 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 SPATA18Q8TC71 538 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 FAXDC2Q96IV6 333 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 PGLYRP2Q96PD5 576 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 ACBD6Q9BR61 282 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 CISHQ9NSE2 258 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 FBXW11Q9UKB1 542 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 GTF3C4Q9UKN8 822 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 BARX2Q9UMQ3 279 aaPredicted RBP13.88□□□□□ -0.19
CCDC42-202ENST00000539522 BRWD1Q9NSI6 2320 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 DENND4AQ7Z401 1863 aa13.88□□□□□ -0.19
CCDC42-202ENST00000539522 MTMR11A4FU01 709 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 OR6C75A6NL08 312 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 H7C4K7 107 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 NRG2O14511 850 aaPredicted RBP13.87□□□□□ -0.19
CCDC42-202ENST00000539522 TPM2P07951 284 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 PNMA6AP0CW24 399 aaPredicted RBP13.87□□□□□ -0.19
CCDC42-202ENST00000539522 CD58P19256 250 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 KLRC2P26717 231 aa13.87□□□□□ -0.19
CCDC42-202ENST00000539522 GNL1P36915 607 aaPredicted RBP13.87□□□□□ -0.19
CCDC42-202ENST00000539522 LHX1P48742 406 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms