RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 XBP1P17861 261 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 HSPA4P34932 840 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 GFPT1Q06210 699 aaPredicted RBP13.11□□□□□ -0.31
YBX3-207ENST00000539204 MYBPC2Q14324 1141 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 VEPH1Q14D04 833 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 TRIP6Q15654 476 aaKnown RBP13.11□□□□□ -0.31
YBX3-207ENST00000539204 SPDYCQ5MJ68 293 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 NAIF1Q69YI7 327 aaPredicted RBP13.11□□□□□ -0.31
YBX3-207ENST00000539204 ARMCX6Q7L4S7 300 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 TTC30AQ86WT1 665 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 CATSPER3Q86XQ3 398 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 TMEFF1Q8IYR6 380 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 CPA6Q8N4T0 437 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 MAB21L3Q8N8X9 362 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 CEP76Q8TAP6 659 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 EZH1Q92800 747 aaPredicted RBP13.11□□□□□ -0.31
YBX3-207ENST00000539204 USP13Q92995 863 aaPredicted RBP13.11□□□□□ -0.31
YBX3-207ENST00000539204 CDT1Q9H211 546 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 ECT2Q9H8V3 914 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 PTPRHQ9HD43 1115 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 SCUBE2Q9NQ36 999 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 SLC6A14Q9UN76 642 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 RAXQ9Y2V3 346 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 PCDHB9Q9Y5E1 797 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 CFIP05156 583 aa13.1□□□□□ -0.31
YBX3-207ENST00000539204 PSMA5P28066 241 aa13.1□□□□□ -0.31
YBX3-207ENST00000539204 PTGER3P43115 390 aa13.1□□□□□ -0.31
YBX3-207ENST00000539204 C2orf27AQ580R0 203 aa13.1□□□□□ -0.31
YBX3-207ENST00000539204 LMBRD2Q68DH5 695 aaPredicted RBP13.1□□□□□ -0.31
YBX3-207ENST00000539204 DSTYKQ6XUX3 929 aa13.1□□□□□ -0.31
YBX3-207ENST00000539204 MDM1Q8TC05 714 aa13.1□□□□□ -0.31
YBX3-207ENST00000539204 OXER1Q8TDS5 423 aa13.1□□□□□ -0.31
YBX3-207ENST00000539204 ADAMTS14Q8WXS8 1223 aa13.1□□□□□ -0.31
YBX3-207ENST00000539204 KCNB2Q92953 911 aa13.1□□□□□ -0.31
YBX3-207ENST00000539204 SPACA7Q96KW9 195 aa13.1□□□□□ -0.31
YBX3-207ENST00000539204 SEPT5Q99719 369 aaPredicted RBP13.1□□□□□ -0.31
YBX3-207ENST00000539204 LPIN3Q9BQK8 851 aa13.1□□□□□ -0.31
YBX3-207ENST00000539204 KIF9Q9HAQ2 790 aa13.1□□□□□ -0.31
YBX3-207ENST00000539204 IL21Q9HBE4 155 aa13.1□□□□□ -0.31
YBX3-207ENST00000539204 POLD4Q9HCU8 107 aa13.1□□□□□ -0.31
YBX3-207ENST00000539204 TUFT1Q9NNX1 390 aa13.1□□□□□ -0.31
YBX3-207ENST00000539204 URB1O60287 2271 aaKnown RBP13.1□□□□□ -0.31
YBX3-207ENST00000539204 ARHGEF35A5YM69 484 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 LARGE1O95461 756 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 MCF2P10911 925 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 DDX6P26196 483 aaKnown RBP eCLIP13.09□□□□□ -0.31
YBX3-207ENST00000539204 P2RY2P41231 377 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 NR1H3Q13133 447 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 BYSLQ13895 437 aaKnown RBP13.09□□□□□ -0.31
YBX3-207ENST00000539204 CRY1Q16526 586 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 DUOXA1Q1HG43 343 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 EARS2Q5JPH6 523 aaKnown RBP13.09□□□□□ -0.31
YBX3-207ENST00000539204 LYSMD4Q5XG99 296 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 OVOS1Q6IE37 1185 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 TTC9BQ8N6N2 239 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 PNPLA1Q8N8W4 532 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 MDGA1Q8NFP4 955 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 OLIG1Q8TAK6 271 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 NUP210Q8TEM1 1887 aaPredicted RBP13.09□□□□□ -0.31
YBX3-207ENST00000539204 USP33Q8TEY7 942 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 RLN3Q8WXF3 142 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 KIFAP3Q92845 792 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 FNBP1Q96RU3 617 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 MRPL4Q9BYD3 311 aaKnown RBP13.09□□□□□ -0.31
YBX3-207ENST00000539204 DUS2Q9NX74 493 aaKnown RBP13.09□□□□□ -0.31
YBX3-207ENST00000539204 PILRBQ9UKJ0 227 aa13.09□□□□□ -0.31
YBX3-207ENST00000539204 SERPINF2P08697 491 aa13.08□□□□□ -0.32
YBX3-207ENST00000539204 CD59P13987 128 aa13.08□□□□□ -0.32
YBX3-207ENST00000539204 ITPKAP23677 461 aa13.08□□□□□ -0.32
YBX3-207ENST00000539204 HOXD12P35452 270 aa13.08□□□□□ -0.32
YBX3-207ENST00000539204 SEC13P55735 322 aa13.08□□□□□ -0.32
YBX3-207ENST00000539204 SLC10A6Q3KNW5 377 aa13.08□□□□□ -0.32
YBX3-207ENST00000539204 MGAT5BQ3V5L5 792 aa13.08□□□□□ -0.32
YBX3-207ENST00000539204 TXNDC8Q6A555 127 aa13.08□□□□□ -0.32
YBX3-207ENST00000539204 MINDY1Q8N5J2 469 aa13.08□□□□□ -0.32
YBX3-207ENST00000539204 CCDC33Q8N5R6 958 aa13.08□□□□□ -0.32
YBX3-207ENST00000539204 GIPC2Q8TF65 315 aa13.08□□□□□ -0.32
YBX3-207ENST00000539204 OSCP1Q8WVF1 389 aa13.08□□□□□ -0.32
YBX3-207ENST00000539204 ZNF274Q96GC6 653 aaPredicted RBP13.08□□□□□ -0.32
YBX3-207ENST00000539204 TARS2Q9BW92 718 aaKnown RBP13.08□□□□□ -0.32
YBX3-207ENST00000539204 TUBGCP4Q9UGJ1 667 aa13.08□□□□□ -0.32
YBX3-207ENST00000539204 SNX14Q9Y5W7 946 aa13.08□□□□□ -0.32
YBX3-207ENST00000539204 NAV2Q8IVL1 2488 aa13.08□□□□□ -0.32
YBX3-207ENST00000539204 PI4KAP42356 2102 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 APC2O95996 2303 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 CCDC169A6NNP5 214 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 K7EQS6 105 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 ARHGAP33O14559 1287 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 MED24O75448 989 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 F11P03951 625 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 FTH1P19P0C7X4 201 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 TYMPP19971 482 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 NMT1P30419 496 aaKnown RBP13.07□□□□□ -0.32
YBX3-207ENST00000539204 LRPAP1P30533 357 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 DMP1Q13316 513 aaPredicted RBP13.07□□□□□ -0.32
YBX3-207ENST00000539204 SLC14A1Q13336 389 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 ZNF268Q14587 947 aaPredicted RBP13.07□□□□□ -0.32
YBX3-207ENST00000539204 MON1AQ86VX9 555 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 FRMD1Q8N878 549 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 WHAMMQ8TF30 809 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms