RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 SERPING1P05155 500 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 P4HA1P13674 534 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 SOX5P35711 763 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 STAT1P42224 750 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 ARID5AQ03989 594 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 UBE3AQ05086 875 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 CUL2Q13617 745 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 USP41Q3LFD5 358 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 CEP57Q86XR8 500 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 ADGRF2Q8IZF7 708 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 VPS52Q8N1B4 723 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 PPM1KQ8N3J5 372 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 UBR7Q8N806 425 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 APPL2Q8NEU8 664 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 LRCH3Q96II8 777 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 FAXDC2Q96IV6 333 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 KREMEN1Q96MU8 473 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 TTPALQ9BTX7 342 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 TTYH1Q9H313 450 aaPredicted RBP18.39■□□□□ 0.53
CLN6-202ENST00000538696 ZNF576Q9H609 170 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 CHST7Q9NS84 486 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 REXO2Q9Y3B8 237 aaKnown RBP18.39■□□□□ 0.53
CLN6-202ENST00000538696 NME7Q9Y5B8 376 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 CHD9Q3L8U1 2897 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 A0A0U1RQJ8 604 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 ARHGEF37A1IGU5 675 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 ZSCAN12O43309 604 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 TACC1O75410 805 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 GFPT2O94808 682 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 WEE2P0C1S8 567 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 CCDC175P0C221 793 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 WARSP23381 471 aaKnown RBP18.38■□□□□ 0.53
CLN6-202ENST00000538696 TBXAS1P24557 533 aaPredicted RBP18.38■□□□□ 0.53
CLN6-202ENST00000538696 CLCN1P35523 988 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 CYLC1P35663 651 aaPredicted RBP18.38■□□□□ 0.53
CLN6-202ENST00000538696 GLUD2P49448 558 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 CDH8P55286 799 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 GCNT1Q02742 428 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 MAPK8IP2Q13387 824 aaPredicted RBP18.38■□□□□ 0.53
CLN6-202ENST00000538696 TDRD12Q587J7 1177 aaKnown RBP18.38■□□□□ 0.53
CLN6-202ENST00000538696 VARS2Q5ST30 1063 aaKnown RBP18.38■□□□□ 0.53
CLN6-202ENST00000538696 DPH6Q7L8W6 267 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 IRF2BP2Q7Z5L9 587 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 CCDC170Q8IYT3 715 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 ATRIPQ8WXE1 791 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 CYP3A43Q9HB55 503 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 STK39Q9UEW8 545 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 PUF60Q9UHX1 559 aaKnown RBP18.38■□□□□ 0.53
CLN6-202ENST00000538696 DSEQ9UL01 958 aa18.38■□□□□ 0.53
CLN6-202ENST00000538696 PLXNA3P51805 1871 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 SSU72P8A0A1W2PR75 194 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 RFXAPO00287 272 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 FSCN2O14926 492 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 CCP110O43303 1012 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 HCRTO43612 131 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 CSPG5O95196 566 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 URODP06132 367 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 CTSAP10619 480 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 FERP16591 822 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 KIF11P52732 1056 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 ERVFC1P60507 584 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 DSG1Q02413 1049 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 KLHL30Q0D2K2 578 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 CAMK1Q14012 370 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 MRPL58Q14197 206 aaKnown RBP18.37■□□□□ 0.53
CLN6-202ENST00000538696 KIAA0319Q5VV43 1072 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 PRSS55Q6UWB4 352 aaPredicted RBP18.37■□□□□ 0.53
CLN6-202ENST00000538696 TMEM86AQ8N2M4 240 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 SPATA18Q8TC71 538 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 AUTS2Q8WXX7 1259 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 RIN2Q8WYP3 895 aaPredicted RBP18.37■□□□□ 0.53
CLN6-202ENST00000538696 PIK3R5Q8WYR1 880 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 CCDC42Q96M95 316 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 RTP3Q9BQQ7 232 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 TLR9Q9NR96 1032 aa18.37■□□□□ 0.53
CLN6-202ENST00000538696 PTPRDP23468 1912 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 EIF3CLB5ME19 914 aaKnown RBP18.36■□□□□ 0.53
CLN6-202ENST00000538696 GABRDO14764 452 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 LPXNO60711 386 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 OAZ2O95190 189 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 FAM163BP0C2L3 166 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 CD58P19256 250 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 ACO1P21399 889 aaKnown RBP18.36■□□□□ 0.53
CLN6-202ENST00000538696 IRS1P35568 1242 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 PRKCIP41743 596 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 YWHAHQ04917 246 aaPredicted RBP18.36■□□□□ 0.53
CLN6-202ENST00000538696 INCA1Q0VD86 236 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 PTPN14Q15678 1187 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 ASTE1Q2TB18 679 aaPredicted RBP18.36■□□□□ 0.53
CLN6-202ENST00000538696 OVOS1Q6IE37 1185 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 METTL23Q86XA0 190 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 LNX1Q8TBB1 728 aaPredicted RBP18.36■□□□□ 0.53
CLN6-202ENST00000538696 EIF3CQ99613 913 aaKnown RBP18.36■□□□□ 0.53
CLN6-202ENST00000538696 TCF25Q9BQ70 676 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 DEF6Q9H4E7 631 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 HAUS4Q9H6D7 363 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 HMGXB4Q9UGU5 601 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 PCDHGC5Q9Y5F6 944 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 MYO7AQ13402 2215 aa18.36■□□□□ 0.53
CLN6-202ENST00000538696 CHD7Q9P2D1 2997 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms