RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 STK32BQ9NY57 414 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 COQ4Q9Y3A0 265 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 GYS1P13807 737 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 PHBP35232 272 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 GPX6P59796 221 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 GPSM2P81274 684 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 PRKD1Q15139 912 aaPredicted RBP19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 MYLK4Q86YV6 388 aaPredicted RBP19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 CCDC17Q96LX7 622 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 DHRS4Q9BTZ2 278 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 POLIQ9UNA4 740 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 B2RBV5 119 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 GAS7O60861 476 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 CIB2O75838 187 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 APBA3O96018 575 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 IL1BP01584 269 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 CD58P19256 250 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 MCCD1P59942 119 aaPredicted RBP19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 ACTR3P61158 418 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 NOP14P78316 857 aaKnown RBP19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 CDC16Q13042 620 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 RFX8Q6ZV50 586 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 LCA5Q86VQ0 697 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 KLHL23Q8NBE8 558 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 DHX38Q92620 1227 aaKnown RBP19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 PAFAH2Q99487 392 aa19.55■□□□□ 0.72
SFSWAP-207ENST00000538548 ADRB2P07550 413 aa19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 PABPC4LP0CB38 370 aaKnown RBP19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 EEF2P13639 858 aaKnown RBP19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 ARL4CP56559 192 aa19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 RIPOR1Q6ZS17 1223 aa19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 PHLDB2Q86SQ0 1253 aa19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 SCUBE1Q8IWY4 988 aa19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 NMUR2Q9GZQ4 415 aa19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 C12orf65Q9H3J6 166 aaKnown RBP19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 RBBP6Q7Z6E9 1792 aaKnown RBP19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 CLUHO75153 1309 aa19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 H3BRJ5 948 aa19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 DHRS4L1P0CG22 281 aa19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 MYL2P10916 166 aa19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 NFX1Q12986 1120 aaKnown RBP19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 KLHL38Q2WGJ6 581 aa19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 ACAD11Q709F0 780 aa19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 LXNQ9BS40 222 aa19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 ALG13Q9NP73 1137 aaKnown RBP19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 ARMCX1Q9P291 453 aa19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 SH3BP1Q9Y3L3 701 aa19.54■□□□□ 0.72
SFSWAP-207ENST00000538548 LOXHD1Q8IVV2 1947 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 TM7SF2O76062 418 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 HLA-DOAP06340 250 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 KRT5P13647 590 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 ETS1P14921 441 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 TFDP1Q14186 410 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 EFTUD2Q15029 972 aaKnown RBP eCLIP19.53■□□□□ 0.722e-10■■□□□ 12.8
SFSWAP-207ENST00000538548 HIF1AQ16665 826 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 NME8Q8N427 588 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 ATP11CQ8NB49 1132 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 CPA5Q8WXQ8 436 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 PANX3Q96QZ0 392 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 ACSS3Q9H6R3 686 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 GPAMQ9HCL2 828 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 MYPNQ86TC9 1320 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 GOLGA8RI6L899 631 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 RNASEH1O60930 286 aaKnown RBP19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 GLRA2P23416 452 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 NSFP46459 744 aaKnown RBP19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 SNRPFP62306 86 aaKnown RBP19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 HNRNPDQ14103 355 aaKnown RBP19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 PRR5LQ6MZQ0 368 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 LLGL2Q6P1M3 1020 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 PADI6Q6TGC4 694 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 ANKMY2Q8IV38 441 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 FBXL13Q8NEE6 735 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 TMEM8AQ9HCN3 771 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 NYAP2Q9P242 653 aa19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 DRG1Q9Y295 367 aaKnown RBP19.53■□□□□ 0.72
SFSWAP-207ENST00000538548 CAPN14A8MX76 684 aa19.52■□□□□ 0.72
SFSWAP-207ENST00000538548 LGR5O75473 907 aa19.52■□□□□ 0.72
SFSWAP-207ENST00000538548 ATP2B4P23634 1241 aa19.52■□□□□ 0.72
SFSWAP-207ENST00000538548 GJC1P36383 396 aa19.52■□□□□ 0.72
SFSWAP-207ENST00000538548 CPA2P48052 419 aa19.52■□□□□ 0.72
SFSWAP-207ENST00000538548 RBM5P52756 815 aaKnown RBP eCLIP19.52■□□□□ 0.72
SFSWAP-207ENST00000538548 WDR11Q9BZH6 1224 aa19.52■□□□□ 0.72
SFSWAP-207ENST00000538548 DENND3A2RUS2 1198 aa19.52■□□□□ 0.71
SFSWAP-207ENST00000538548 LPXNO60711 386 aa19.52■□□□□ 0.71
SFSWAP-207ENST00000538548 ETV4P43268 484 aa19.52■□□□□ 0.71
SFSWAP-207ENST00000538548 SNRNP35Q16560 246 aaKnown RBP19.52■□□□□ 0.71
SFSWAP-207ENST00000538548 DPY19L2Q6NUT2 758 aa19.52■□□□□ 0.71
SFSWAP-207ENST00000538548 ULK2Q8IYT8 1036 aa19.52■□□□□ 0.71
SFSWAP-207ENST00000538548 RBM15BQ8NDT2 890 aaKnown RBP19.52■□□□□ 0.71
SFSWAP-207ENST00000538548 KLF6Q99612 283 aaPredicted RBP19.52■□□□□ 0.71
SFSWAP-207ENST00000538548 RAB20Q9NX57 234 aa19.52■□□□□ 0.71
SFSWAP-207ENST00000538548 PLA2G4CQ9UP65 541 aa19.52■□□□□ 0.71
SFSWAP-207ENST00000538548 SUGT1Q9Y2Z0 365 aa19.52■□□□□ 0.71
SFSWAP-207ENST00000538548 GOLGA8IPA6NC78 632 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 C2orf71A6NGG8 1288 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 GOLGA8JA6NMD2 632 aa19.51■□□□□ 0.71
SFSWAP-207ENST00000538548 TAL1P17542 331 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms