RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ENC1O14682 589 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 PLEKP08567 350 aaPredicted RBP7.68□□□□□ -1.18
MSH6-209ENST00000538136 EPCAMP16422 314 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 CYLC1P35663 651 aaPredicted RBP7.68□□□□□ -1.18
MSH6-209ENST00000538136 EIF4A3P38919 411 aaKnown RBP7.68□□□□□ -1.18
MSH6-209ENST00000538136 GFPT1Q06210 699 aaPredicted RBP7.68□□□□□ -1.18
MSH6-209ENST00000538136 COL9A2Q14055 689 aaPredicted RBP7.68□□□□□ -1.18
MSH6-209ENST00000538136 LPAL2Q16609 132 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 C1orf127Q8N9H9 656 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 BTBD6Q96KE9 485 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 MYOCQ99972 504 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 NIF3L1Q9GZT8 377 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 C17orf75Q9HAS0 396 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 CASZ1Q86V15 1759 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 SLC12A8A0AV02 714 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 TTC26A0AVF1 554 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 GALTP07902 379 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 HDCP19113 662 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 HOXA11P31270 313 aaPredicted RBP7.68□□□□□ -1.18
MSH6-209ENST00000538136 EPHB3P54753 998 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 YWHAEP62258 255 aaKnown RBP7.68□□□□□ -1.18
MSH6-209ENST00000538136 TWF1Q12792 350 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 KRT81Q14533 505 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 TDRD10Q5VZ19 366 aaKnown RBP7.68□□□□□ -1.18
MSH6-209ENST00000538136 CAPN12Q6ZSI9 719 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 C16orf59Q7L2K0 433 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 TFAP2DQ7Z6R9 452 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 FAM131BQ86XD5 332 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 TTC9BQ8N6N2 239 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 KREMEN2Q8NCW0 462 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 ZNF518BQ9C0D4 1074 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 GPATCH2LQ9NWQ4 482 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 PACSIN2Q9UNF0 486 aaPredicted RBP7.68□□□□□ -1.18
MSH6-209ENST00000538136 HPSEQ9Y251 543 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 HEY1Q9Y5J3 304 aa7.68□□□□□ -1.18
MSH6-209ENST00000538136 CCDC195A0A1B0GUA6 201 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 RNF8O76064 485 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 LILRA4P59901 499 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 GRM2Q14416 872 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 KCNT1Q5JUK3 1230 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 RTN4RL1Q86UN2 441 aaPredicted RBP7.67□□□□□ -1.18
MSH6-209ENST00000538136 SLC47A2Q86VL8 602 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 ARHGEF19Q8IW93 802 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 DCP1BQ8IZD4 617 aaKnown RBP7.67□□□□□ -1.18
MSH6-209ENST00000538136 TRIML1Q8N9V2 468 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 OR8K1Q8NGG5 319 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 SCAMP5Q8TAC9 235 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 DDI1Q8WTU0 396 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 PRIMPOLQ96LW4 560 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 CCDC114Q96M63 670 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 NECAB3Q96P71 396 aaPredicted RBP7.67□□□□□ -1.18
MSH6-209ENST00000538136 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.67□□□□□ -1.183e-11■■■■■ 27.5
MSH6-209ENST00000538136 MYH6P13533 1939 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 TRIP12Q14669 1992 aaPredicted RBP7.67□□□□□ -1.18
MSH6-209ENST00000538136 A0A0B4J269 797 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 SOWAHDA6NJG2 315 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 MYO1FO00160 1098 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 PPP1R2P41236 205 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 ERVFC1P60507 584 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 ADIGQ0VDE8 80 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 MTF1Q14872 753 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 UBXN2BQ14CS0 331 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 ZNF569Q5MCW4 686 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 ZPBP2Q6X784 338 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 DAAM2Q86T65 1068 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 BRSK2Q8IWQ3 736 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 USP38Q8NB14 1042 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 ENOX1Q8TC92 643 aaKnown RBP7.67□□□□□ -1.18
MSH6-209ENST00000538136 HAUS4Q9H6D7 363 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 KCND2Q9NZV8 630 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 ARHGAP28Q9P2N2 729 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 LIMD1Q9UGP4 676 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 DNAI1Q9UI46 699 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 COL24A1Q17RW2 1714 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.67□□□□□ -1.18
MSH6-209ENST00000538136 A8MX80 341 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 C9IYK1 514 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 N4BP1O75113 896 aaKnown RBP7.67□□□□□ -1.18
MSH6-209ENST00000538136 GPR32O75388 356 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 ERCC5P28715 1186 aaPredicted RBP7.67□□□□□ -1.18
MSH6-209ENST00000538136 CETN2P41208 172 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 PXNP49023 591 aaPredicted RBP7.67□□□□□ -1.18
MSH6-209ENST00000538136 WNT7BP56706 349 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 CLLU1OSQ5K130 101 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 RTP2Q5QGT7 225 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 TXNDC8Q6A555 127 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 RNF135Q8IUD6 432 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 ZNF366Q8N895 744 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 MNS1Q8NEH6 495 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 USP33Q8TEY7 942 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 SLC20A1Q8WUM9 679 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 SNX19Q92543 992 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 RNF25Q96BH1 459 aaPredicted RBP7.67□□□□□ -1.18
MSH6-209ENST00000538136 CHP1Q99653 195 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 TLR9Q9NR96 1032 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 HCFC1R1Q9NWW0 138 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 DDIT4Q9NX09 232 aa7.67□□□□□ -1.18
MSH6-209ENST00000538136 KLRC4O43908 158 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 FTCDO95954 541 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 UCHL3P15374 230 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms