RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 PFKFB1P16118 471 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 ARF4P18085 180 aaPredicted RBP6.5□□□□□ -1.37
DDB1-210ENST00000538129 SYKP43405 635 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 FXR1P51114 621 aaKnown RBP eCLIP6.5□□□□□ -1.376e-7■■■■□ 19.4
DDB1-210ENST00000538129 NDUFA8P51970 172 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 RABGGTBP53611 331 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 NCKAP1LP55160 1127 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 STRN3Q13033 797 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 LONRF3Q496Y0 759 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 UBXN11Q5T124 520 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 TWF2Q6IBS0 349 aaKnown RBP6.5□□□□□ -1.37
DDB1-210ENST00000538129 NOTUMQ6P988 496 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 ZPBP2Q6X784 338 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 CLEC17AQ6ZS10 378 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 ZNF720Q7Z2F6 126 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 HDXQ7Z353 690 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 HAUS6Q7Z4H7 955 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 APBB1IPQ7Z5R6 666 aaPredicted RBP6.5□□□□□ -1.37
DDB1-210ENST00000538129 TMCO2Q7Z6W1 182 aaPredicted RBP6.5□□□□□ -1.37
DDB1-210ENST00000538129 ECHDC2Q86YB7 292 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 CCDC65Q8IXS2 484 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 TMEM161BQ8NDZ6 487 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 GPBAR1Q8TDU6 330 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 MRPS27Q92552 414 aaKnown RBP6.5□□□□□ -1.37
DDB1-210ENST00000538129 EZH1Q92800 747 aaPredicted RBP6.5□□□□□ -1.37
DDB1-210ENST00000538129 TIFAQ96CG3 184 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 ZNF689Q96CS4 500 aaPredicted RBP6.5□□□□□ -1.37
DDB1-210ENST00000538129 PGBD4Q96DM1 585 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 CCDC34Q96HJ3 373 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 YME1L1Q96TA2 773 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 MRPL4Q9BYD3 311 aaKnown RBP6.5□□□□□ -1.37
DDB1-210ENST00000538129 TRIM9Q9C026 710 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 MIR1-1HGQ9H1L0 117 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 ZHX3Q9H4I2 956 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 SLC28A3Q9HAS3 691 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 UBN1Q9NPG3 1134 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 FAM105AQ9NUU6 356 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 PANK4Q9NVE7 773 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 PCOLCE2Q9UKZ9 415 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 PIN4Q9Y237 131 aaKnown RBP6.5□□□□□ -1.37
DDB1-210ENST00000538129 PCDHB2Q9Y5E7 798 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 ADGRA3Q8IWK6 1321 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 CNTNAP2Q9UHC6 1331 aa6.5□□□□□ -1.37
DDB1-210ENST00000538129 CHD9Q3L8U1 2897 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 PVALEFA0A1B0GWK0 134 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 N4BP3O15049 544 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 TMPRSS2O15393 492 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 B4GALT5O43286 388 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 ZNF202O95125 648 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 PRKCBP05771 671 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 CELA3AP09093 270 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 MYOGP15173 224 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 GTF2BQ00403 316 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 TAP1Q03518 808 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 ALCAMQ13740 583 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 HERC4Q5GLZ8 1057 aaPredicted RBP6.49□□□□□ -1.37
DDB1-210ENST00000538129 NT5DC1Q5TFE4 455 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 CDPF1Q6NVV7 123 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 SLC27A1Q6PCB7 646 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 KRBA2Q6ZNG9 492 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 FAM178BQ8IXR5 827 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 SMYD4Q8IYR2 804 aaPredicted RBP6.49□□□□□ -1.37
DDB1-210ENST00000538129 CMTR2Q8IYT2 770 aaKnown RBP6.49□□□□□ -1.37
DDB1-210ENST00000538129 HACE1Q8IYU2 909 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 ABI1Q8IZP0 508 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 FIBCD1Q8N539 461 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 FSIP1Q8NA03 581 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 PAGE5Q96GU1 130 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 CPB2Q96IY4 423 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 TIGD1Q96MW7 591 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 SAMD11Q96NU1 681 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 FANCD2OSQ96PS1 177 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 FIZ1Q96SL8 496 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 ACO2Q99798 780 aaKnown RBP6.49□□□□□ -1.37
DDB1-210ENST00000538129 KIFC3Q9BVG8 833 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 OSBPL1AQ9BXW6 950 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 TMEM117Q9H0C3 514 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 GSX1Q9H4S2 264 aaPredicted RBP6.49□□□□□ -1.37
DDB1-210ENST00000538129 MRPL44Q9H9J2 332 aaKnown RBP6.49□□□□□ -1.37
DDB1-210ENST00000538129 PTPRHQ9HD43 1115 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 OLFML3Q9NRN5 406 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 RNF112Q9ULX5 631 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 TBX20Q9UMR3 447 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 TNFSF13BQ9Y275 285 aa6.49□□□□□ -1.37
DDB1-210ENST00000538129 YBX2Q9Y2T7 364 aaKnown RBP6.49□□□□□ -1.37
DDB1-210ENST00000538129 FNDC1Q4ZHG4 1894 aaPredicted RBP6.49□□□□□ -1.37
DDB1-210ENST00000538129 TRANK1O15050 2925 aa6.48□□□□□ -1.37
DDB1-210ENST00000538129 SCO2A0A1W2PP80 73 aa6.48□□□□□ -1.37
DDB1-210ENST00000538129 LINC01553A4QN01 128 aa6.48□□□□□ -1.37
DDB1-210ENST00000538129 RBAK-RBAKDNI3L0D1 243 aa6.48□□□□□ -1.37
DDB1-210ENST00000538129 PAGE1O75459 146 aa6.48□□□□□ -1.37
DDB1-210ENST00000538129 OFD1O75665 1012 aa6.48□□□□□ -1.37
DDB1-210ENST00000538129 TOM1L1O75674 476 aa6.48□□□□□ -1.37
DDB1-210ENST00000538129 PIGRP01833 764 aa6.48□□□□□ -1.37
DDB1-210ENST00000538129 RB1P06400 928 aa6.48□□□□□ -1.37
DDB1-210ENST00000538129 CA3P07451 260 aa6.48□□□□□ -1.37
DDB1-210ENST00000538129 NFICP08651 508 aa6.48□□□□□ -1.37
DDB1-210ENST00000538129 ITGA4P13612 1032 aa6.48□□□□□ -1.37
DDB1-210ENST00000538129 IDEP14735 1019 aa6.48□□□□□ -1.37
DDB1-210ENST00000538129 PROZP22891 400 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms