RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 GPR35Q9HC97 309 aa6.74□□□□□ -1.33
CCDC7-208ENST00000537047 CFAP20Q9Y6A4 193 aaKnown RBP6.74□□□□□ -1.33
CCDC7-208ENST00000537047 ZNF804BA4D1E1 1349 aa6.74□□□□□ -1.33
CCDC7-208ENST00000537047 GNAI3P08754 354 aa6.73□□□□□ -1.33
CCDC7-208ENST00000537047 KELP23276 732 aa6.73□□□□□ -1.33
CCDC7-208ENST00000537047 PRDX5P30044 214 aa6.73□□□□□ -1.33
CCDC7-208ENST00000537047 CDKN1CP49918 316 aaPredicted RBP6.73□□□□□ -1.33
CCDC7-208ENST00000537047 GNAI1P63096 354 aa6.73□□□□□ -1.33
CCDC7-208ENST00000537047 PROSER3Q2NL68 480 aa6.73□□□□□ -1.33
CCDC7-208ENST00000537047 C11orf87Q6NUJ2 197 aa6.73□□□□□ -1.33
CCDC7-208ENST00000537047 FAM109AQ8N4B1 249 aa6.73□□□□□ -1.33
CCDC7-208ENST00000537047 ZBTB9Q96C00 473 aa6.73□□□□□ -1.33
CCDC7-208ENST00000537047 FAM136AQ96C01 138 aa6.73□□□□□ -1.33
CCDC7-208ENST00000537047 MTMR8Q96EF0 704 aa6.73□□□□□ -1.33
CCDC7-208ENST00000537047 ARHGEF3Q9NR81 526 aa6.73□□□□□ -1.33
CCDC7-208ENST00000537047 SIDT1Q9NXL6 827 aaKnown RBP6.73□□□□□ -1.33
CCDC7-208ENST00000537047 TISP43B9A030 160 aa6.72□□□□□ -1.33
CCDC7-208ENST00000537047 SMIM22K7EJ46 135 aa6.72□□□□□ -1.33
CCDC7-208ENST00000537047 SMARCA1P28370 1054 aa6.72□□□□□ -1.33
CCDC7-208ENST00000537047 EPHB2P29323 1055 aa6.72□□□□□ -1.33
CCDC7-208ENST00000537047 CD6P30203 668 aa6.72□□□□□ -1.33
CCDC7-208ENST00000537047 CYP2C19P33261 490 aa6.72□□□□□ -1.33
CCDC7-208ENST00000537047 GUCY2FP51841 1108 aa6.72□□□□□ -1.33
CCDC7-208ENST00000537047 BMPR2Q13873 1038 aa6.72□□□□□ -1.33
CCDC7-208ENST00000537047 FAM50AQ14320 339 aaKnown RBP6.72□□□□□ -1.33
CCDC7-208ENST00000537047 SUPT20HL1Q3ZLR7 823 aa6.72□□□□□ -1.33
CCDC7-208ENST00000537047 ZNF551Q7Z340 670 aaPredicted RBP6.72□□□□□ -1.33
CCDC7-208ENST00000537047 FAM90A1Q86YD7 464 aa6.72□□□□□ -1.33
CCDC7-208ENST00000537047 CNPPD1Q9BV87 410 aa6.72□□□□□ -1.33
CCDC7-208ENST00000537047 TINAGL1Q9GZM7 467 aaPredicted RBP6.72□□□□□ -1.33
CCDC7-208ENST00000537047 CFAP97Q9P2B7 532 aa6.72□□□□□ -1.33
CCDC7-208ENST00000537047 ZRANB2O95218 330 aaKnown RBP eCLIP6.71□□□□□ -1.34
CCDC7-208ENST00000537047 CYP2D6P10635 497 aa6.71□□□□□ -1.34
CCDC7-208ENST00000537047 RARBP10826 455 aa6.71□□□□□ -1.34
CCDC7-208ENST00000537047 ITGALP20701 1170 aa6.71□□□□□ -1.34
CCDC7-208ENST00000537047 CTGFP29279 349 aa6.71□□□□□ -1.34
CCDC7-208ENST00000537047 PIK3CGP48736 1102 aa6.71□□□□□ -1.34
CCDC7-208ENST00000537047 CLCN2P51788 898 aa6.71□□□□□ -1.34
CCDC7-208ENST00000537047 MAPK7Q13164 816 aa6.71□□□□□ -1.34
CCDC7-208ENST00000537047 PLAC9Q5JTB6 97 aa6.71□□□□□ -1.34
CCDC7-208ENST00000537047 CEP78Q5JTW2 689 aa6.71□□□□□ -1.34
CCDC7-208ENST00000537047 MAVSQ7Z434 540 aa6.71□□□□□ -1.34
CCDC7-208ENST00000537047 PPP1R32Q7Z5V6 425 aa6.71□□□□□ -1.34
CCDC7-208ENST00000537047 YTHDF3Q7Z739 585 aaKnown RBP6.71□□□□□ -1.34
CCDC7-208ENST00000537047 PNMA8AQ86V59 439 aaPredicted RBP6.71□□□□□ -1.34
CCDC7-208ENST00000537047 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.71□□□□□ -1.34
CCDC7-208ENST00000537047 TNPO1Q92973 898 aaKnown RBP6.71□□□□□ -1.34
CCDC7-208ENST00000537047 MAN1C1Q9NR34 630 aa6.71□□□□□ -1.34
CCDC7-208ENST00000537047 RLIMQ9NVW2 624 aa6.71□□□□□ -1.34
CCDC7-208ENST00000537047 MRFAP1Q9Y605 127 aa6.71□□□□□ -1.34
CCDC7-208ENST00000537047 RAD54BQ9Y620 910 aa6.71□□□□□ -1.34
CCDC7-208ENST00000537047 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.7□□□□□ -1.34
CCDC7-208ENST00000537047 SHTN1A0MZ66 631 aa6.7□□□□□ -1.34
CCDC7-208ENST00000537047 H0YIZ8 118 aa6.7□□□□□ -1.34
CCDC7-208ENST00000537047 M0QYG6 137 aa6.7□□□□□ -1.34
CCDC7-208ENST00000537047 FAM163BP0C2L3 166 aa6.7□□□□□ -1.34
CCDC7-208ENST00000537047 NDUFB7P17568 137 aa6.7□□□□□ -1.34
CCDC7-208ENST00000537047 LIPAP38571 399 aa6.7□□□□□ -1.34
CCDC7-208ENST00000537047 GCLCP48506 637 aaPredicted RBP6.7□□□□□ -1.34
CCDC7-208ENST00000537047 ZNF134P52741 427 aa6.7□□□□□ -1.34
CCDC7-208ENST00000537047 EVA1CP58658 441 aa6.7□□□□□ -1.34
CCDC7-208ENST00000537047 KIF22Q14807 665 aa6.7□□□□□ -1.34
CCDC7-208ENST00000537047 EFCAB2Q5VUJ9 269 aa6.7□□□□□ -1.34
CCDC7-208ENST00000537047 USP37Q86T82 979 aa6.7□□□□□ -1.34
CCDC7-208ENST00000537047 ZNF48Q96MX3 618 aaPredicted RBP6.7□□□□□ -1.34
CCDC7-208ENST00000537047 MACROD1Q9BQ69 325 aa6.7□□□□□ -1.34
CCDC7-208ENST00000537047 BTBD3Q9Y2F9 522 aa6.7□□□□□ -1.34
CCDC7-208ENST00000537047 TNKSO95271 1327 aa6.7□□□□□ -1.34
CCDC7-208ENST00000537047 CHEK2O96017 543 aa6.69□□□□□ -1.34
CCDC7-208ENST00000537047 AHSGP02765 367 aa6.69□□□□□ -1.34
CCDC7-208ENST00000537047 FXR1P51114 621 aaKnown RBP eCLIP6.69□□□□□ -1.34
CCDC7-208ENST00000537047 TCF15Q12870 199 aa6.69□□□□□ -1.34
CCDC7-208ENST00000537047 PTPN21Q16825 1174 aa6.69□□□□□ -1.34
CCDC7-208ENST00000537047 SLC44A4Q53GD3 710 aa6.69□□□□□ -1.34
CCDC7-208ENST00000537047 CEP85Q6P2H3 762 aa6.69□□□□□ -1.34
CCDC7-208ENST00000537047 TMEM108Q6UXF1 575 aa6.69□□□□□ -1.34
CCDC7-208ENST00000537047 NEK8Q86SG6 692 aa6.69□□□□□ -1.34
CCDC7-208ENST00000537047 PPP1R3BQ86XI6 285 aa6.69□□□□□ -1.34
CCDC7-208ENST00000537047 C3orf20Q8ND61 904 aa6.69□□□□□ -1.34
CCDC7-208ENST00000537047 ABCF2Q9UG63 623 aa6.69□□□□□ -1.34
CCDC7-208ENST00000537047 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.69□□□□□ -1.34
CCDC7-208ENST00000537047 RPLP2P05387 115 aaKnown RBP6.68□□□□□ -1.34
CCDC7-208ENST00000537047 SFPQP23246 707 aaKnown RBP eCLIP6.68□□□□□ -1.34
CCDC7-208ENST00000537047 ADKP55263 362 aaKnown RBP6.68□□□□□ -1.34
CCDC7-208ENST00000537047 PRAMEF17Q5VTA0 474 aa6.68□□□□□ -1.34
CCDC7-208ENST00000537047 SLC2A7Q6PXP3 512 aa6.68□□□□□ -1.34
CCDC7-208ENST00000537047 FANCBQ8NB91 859 aa6.68□□□□□ -1.34
CCDC7-208ENST00000537047 RPL36ALQ969Q0 106 aaKnown RBP6.68□□□□□ -1.34
CCDC7-208ENST00000537047 SPC25Q9HBM1 224 aa6.68□□□□□ -1.34
CCDC7-208ENST00000537047 GNL3LQ9NVN8 582 aaKnown RBP6.68□□□□□ -1.34
CCDC7-208ENST00000537047 DLL3Q9NYJ7 618 aa6.68□□□□□ -1.34
CCDC7-208ENST00000537047 JTBO76095 146 aa6.67□□□□□ -1.34
CCDC7-208ENST00000537047 CDK11BP21127 795 aaKnown RBP6.67□□□□□ -1.34
CCDC7-208ENST00000537047 CYP2C18P33260 490 aa6.67□□□□□ -1.34
CCDC7-208ENST00000537047 KRT85P78386 507 aa6.67□□□□□ -1.34
CCDC7-208ENST00000537047 NOGQ13253 232 aa6.67□□□□□ -1.34
CCDC7-208ENST00000537047 SLC18B1Q6NT16 456 aa6.67□□□□□ -1.34
CCDC7-208ENST00000537047 HEATR3Q7Z4Q2 680 aa6.67□□□□□ -1.34
CCDC7-208ENST00000537047 FAM46DQ8NEK8 389 aa6.67□□□□□ -1.34
CCDC7-208ENST00000537047 ATRIPQ8WXE1 791 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms