RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 SMC1AQ14683 1233 aaKnown RBP7.74□□□□□ -1.17
YBX3-206ENST00000536823 SMAD2Q15796 467 aaKnown RBP7.74□□□□□ -1.17
YBX3-206ENST00000536823 MAPK6Q16659 721 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 TMEM119Q4V9L6 283 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 ZNF574Q6ZN55 896 aaPredicted RBP7.74□□□□□ -1.17
YBX3-206ENST00000536823 ATG4DQ86TL0 474 aaPredicted RBP7.74□□□□□ -1.17
YBX3-206ENST00000536823 RBM23Q86U06 439 aaKnown RBP7.74□□□□□ -1.17
YBX3-206ENST00000536823 CDR2LQ86X02 465 aaPredicted RBP7.74□□□□□ -1.17
YBX3-206ENST00000536823 ZNF280BQ86YH2 543 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 DAW1Q8N136 415 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 SMRP1Q8NCR6 262 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 VN1R2Q8NFZ6 395 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 INTS4Q96HW7 963 aaKnown RBP7.74□□□□□ -1.17
YBX3-206ENST00000536823 IGSF21Q96ID5 467 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 TMEM175Q9BSA9 504 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 KIFC3Q9BVG8 833 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 APOL6Q9BWW8 343 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 TMPRSS13Q9BYE2 586 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 ZBP1Q9H171 429 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 FZD8Q9H461 694 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 PDZD7Q9H5P4 517 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 CLEC1BQ9P126 229 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 KANSL3Q9P2N6 904 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 DNAJB4Q9UDY4 337 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 PRKAG3Q9UGI9 489 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 BARX2Q9UMQ3 279 aaPredicted RBP7.74□□□□□ -1.17
YBX3-206ENST00000536823 GIT1Q9Y2X7 761 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 HES2Q9Y543 173 aa7.74□□□□□ -1.17
YBX3-206ENST00000536823 TDRD15B5MCY1 1934 aaKnown RBP7.74□□□□□ -1.17
YBX3-206ENST00000536823 MYH11P35749 1972 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 CACNA1HO95180 2353 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 C2orf71A6NGG8 1288 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 ACKR2O00590 384 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 PER2O15055 1255 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 HIP1RO75146 1068 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 DDHD2O94830 711 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 POMCP01189 267 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 EDN1P05305 212 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 SRGAP2BP0DMP2 458 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 CTSAP10619 480 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 ZNF16P17020 682 aaPredicted RBP7.73□□□□□ -1.17
YBX3-206ENST00000536823 GUCY2CP25092 1073 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 SCNN1GP51170 649 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 COASYQ13057 564 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 MAPK7Q13164 816 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 PRPF4BQ13523 1007 aaKnown RBP7.73□□□□□ -1.17
YBX3-206ENST00000536823 KCNC3Q14003 757 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 BMS1Q14692 1282 aaKnown RBP7.73□□□□□ -1.17
YBX3-206ENST00000536823 DCAF4L1Q3SXM0 396 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 RINT1Q6NUQ1 792 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 C1orf186Q6ZWK4 172 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 DDX53Q86TM3 631 aaKnown RBP7.73□□□□□ -1.17
YBX3-206ENST00000536823 ADHFE1Q8IWW8 467 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 COLGALT2Q8IYK4 626 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 VPS52Q8N1B4 723 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 CEP120Q8N960 986 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 MRPL43Q8N983 215 aaKnown RBP7.73□□□□□ -1.17
YBX3-206ENST00000536823 AK8Q96MA6 479 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 DRC1Q96MC2 740 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 FAM193BQ96PV7 902 aaPredicted RBP7.73□□□□□ -1.17
YBX3-206ENST00000536823 GAD1Q99259 594 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 ADPGKQ9BRR6 497 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 TIPINQ9BVW5 301 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 VN1R3Q9BXE9 311 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 NT5C3AQ9H0P0 336 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 CD320Q9NPF0 282 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 ARHGAP28Q9P2N2 729 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 STK39Q9UEW8 545 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 PRG3Q9Y2Y8 225 aaPredicted RBP7.73□□□□□ -1.17
YBX3-206ENST00000536823 PHLPP2Q6ZVD8 1323 aa7.73□□□□□ -1.17
YBX3-206ENST00000536823 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.72□□□□□ -1.17
YBX3-206ENST00000536823 B8ZZF3 427 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 NRP1O14786 923 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 RECQL4O94761 1208 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 SSBP05455 408 aaKnown RBP eCLIP7.72□□□□□ -1.17
YBX3-206ENST00000536823 LIG1P18858 919 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 SYT1P21579 422 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 AKAP5P24588 427 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 NPTX2P47972 431 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 SLC12A3P55017 1021 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 PEX3P56589 373 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 RBM10P98175 930 aaKnown RBP7.72□□□□□ -1.17
YBX3-206ENST00000536823 C19orf57Q0VDD7 668 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 GRIK3Q13003 919 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 RESTQ13127 1097 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 DMP1Q13316 513 aaPredicted RBP7.72□□□□□ -1.17
YBX3-206ENST00000536823 SF3A1Q15459 793 aaKnown RBP7.72□□□□□ -1.17
YBX3-206ENST00000536823 PTPN14Q15678 1187 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 ZRSR1Q15695 479 aaKnown RBP7.72□□□□□ -1.17
YBX3-206ENST00000536823 NT5DC1Q5TFE4 455 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 EEF1DP3Q658K8 133 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 TMEM184AQ6ZMB5 413 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 CABP7Q86V35 215 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 TTC16Q8NEE8 873 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 AUTS2Q8WXX7 1259 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 CDK5RAP3Q96JB5 506 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 RPS6KC1Q96S38 1066 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 HERC2P3Q9BVR0 1158 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 YIPF2Q9BWQ6 316 aa7.72□□□□□ -1.17
YBX3-206ENST00000536823 NIF3L1Q9GZT8 377 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms