RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 C11orf49Q9H6J7 331 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 APOBEC3GQ9HC16 384 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 PARP2Q9UGN5 583 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 DDX3YO15523 660 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 ITGB3P05106 788 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 TNFAIP3P21580 790 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 CYP2C18P33260 490 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 RNASE9P60153 205 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 MYL6P60660 151 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 CETN1Q12798 172 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 NCOA4Q13772 614 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 DSC3Q14574 896 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 TMEM132DQ14C87 1099 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 PPP2R5EQ16537 467 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 MAATS1Q7Z4T9 603 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 PLCD3Q8N3E9 789 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 RNF169Q8NCN4 708 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 CTNNBL1Q8WYA6 563 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 KIF12Q96FN5 646 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 GOLGA2P5Q9HBQ8 144 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 UBE2TQ9NPD8 197 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 CACNG4Q9UBN1 327 aa13.78□□□□□ -0.2
CDK5RAP3-202ENST00000536708 TMCO5BA8MYB1 307 aa13.77□□□□□ -0.21
CDK5RAP3-202ENST00000536708 PPEF2O14830 753 aa13.77□□□□□ -0.21
CDK5RAP3-202ENST00000536708 EIF3HO15372 352 aaKnown RBP eCLIP13.77□□□□□ -0.212e-7■■□□□ 11.6
CDK5RAP3-202ENST00000536708 BUB1BO60566 1050 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-202ENST00000536708 KRT19P08727 400 aa13.77□□□□□ -0.21
CDK5RAP3-202ENST00000536708 MLH1P40692 756 aa13.77□□□□□ -0.21
CDK5RAP3-202ENST00000536708 NOP14P78316 857 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-202ENST00000536708 POU5F1Q01860 360 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-202ENST00000536708 CLUL1Q15846 466 aa13.77□□□□□ -0.21
CDK5RAP3-202ENST00000536708 DNAJC21Q5F1R6 531 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-202ENST00000536708 APBB1IPQ7Z5R6 666 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-202ENST00000536708 CCDC26Q8TAB7 109 aa13.77□□□□□ -0.21
CDK5RAP3-202ENST00000536708 CXorf38Q8TB03 319 aa13.77□□□□□ -0.21
CDK5RAP3-202ENST00000536708 HELQQ8TDG4 1101 aa13.77□□□□□ -0.21
CDK5RAP3-202ENST00000536708 FAM107BQ9H098 131 aa13.77□□□□□ -0.21
CDK5RAP3-202ENST00000536708 CARD9Q9H257 536 aa13.77□□□□□ -0.21
CDK5RAP3-202ENST00000536708 FAM170AA1A519 330 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 DCDC2CA8MYV0 355 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 KRIT1O00522 736 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 PITPNM1O00562 1244 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TLR3O15455 904 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 EN2P19622 333 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 YARSP54577 528 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 SOX4Q06945 474 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 BFSP2Q13515 415 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TRADDQ15628 312 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 KYAT1Q16773 422 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 DUOXA2Q1HG44 320 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ALKAL1Q6UXT8 129 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 SCARA5Q6ZMJ2 495 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 KDM7AQ6ZMT4 941 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 RTN4RL1Q86UN2 441 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 RHOT2Q8IXI1 618 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ANKLE1Q8NAG6 615 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 LRRC45Q96CN5 670 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ANKRD36BP1Q96IX9 119 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 NT5C1BQ96P26 610 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 AGPAT1Q99943 283 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TMEM106CQ9BVX2 250 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ASB7Q9H672 318 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 OSGEPQ9NPF4 335 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 C1orf112Q9NSG2 853 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 CNTN3Q9P232 1028 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 NUB1Q9Y5A7 615 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 LTBP2Q14767 1821 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 FOXN3O00409 490 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 PTGESO14684 152 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 CALCAP01258 141 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TNNC2P02585 160 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 POLR2BP30876 1174 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 SURF1Q15526 300 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 AGMOQ6ZNB7 445 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TADA2BQ86TJ2 420 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 SEZ6LQ9BYH1 1024 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 XYLT2Q9H1B5 865 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ACP6Q9NPH0 428 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 CHST12Q9NRB3 414 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TBX21Q9UL17 535 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 PTPRSQ13332 1948 aa13.76□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TTC3P53804 2025 aa13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 A0A087WUV0 522 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 HMGB1P1B2RPK0 211 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ANKRD65E5RJM6 399 aa13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 H0YGN5 161 aa13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ASS1P00966 412 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 KRT14P02533 472 aa13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 ITGB8P26012 769 aa13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 GTF2A1P52655 376 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 C1orf53Q5VUE5 145 aa13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 DEFB128Q7Z7B8 93 aa13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 DBF4BQ8NFT6 615 aa13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 GAD1Q99259 594 aa13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 NAP1L3Q99457 506 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 AP1M1Q9BXS5 423 aa13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 C2CD2Q9Y426 696 aa13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 NFS1Q9Y697 457 aa13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 TSC2P49815 1807 aa13.75□□□□□ -0.21
CDK5RAP3-202ENST00000536708 FNDC1Q4ZHG4 1894 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms