RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 NIPA1Q7RTP0 329 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 RTN4RL1Q86UN2 441 aaPredicted RBP12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 RHOT2Q8IXI1 618 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 FUKQ8N0W3 1084 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 TEX9Q8N6V9 391 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 GLIS3Q8NEA6 775 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 FAM81AQ8TBF8 368 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 CRYGNQ8WXF5 182 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 LINC01599Q8WXQ3 324 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 FAM20AQ96MK3 541 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 ERP44Q9BS26 406 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 PABPC3Q9H361 631 aaKnown RBP12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 CCDC134Q9H6E4 229 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 KCNMB3Q9NPA1 279 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 AMACRQ9UHK6 382 aa12.33□□□□□ -0.44
CHRNB1-202ENST00000536404 IGLV3-22A0A075B6J6 115 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 IGKV6D-21A0A0A0MT36 114 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 POTEB3A0JP26 581 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 CCT8L1PA6NM43 557 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 BACH1O14867 736 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 TTI1O43156 1089 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 BUB1BO60566 1050 aaPredicted RBP12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 SMNDC1O75940 238 aaKnown RBP eCLIP12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 NR3C1P04150 777 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 CYP3A4P08684 503 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 SLC9A1P19634 815 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 DRD4P21917 467 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 RPA1P27694 616 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 ATP5DP30049 168 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 SOX5P35711 763 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 PEX19P40855 299 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 SCTRP47872 440 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 PAPOLAP51003 745 aaKnown RBP12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 PMS2P54278 862 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 HADHBP55084 474 aaKnown RBP12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 DYNC1I2Q13409 638 aaKnown RBP12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 RIPK1Q13546 671 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 ZRSR2Q15696 482 aaKnown RBP12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 ECM1Q16610 540 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 HHATQ5VTY9 493 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 POTEBQ6S5H4 581 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 MTHFD1LQ6UB35 978 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 UBL4BQ8N7F7 174 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 CCT6BQ92526 530 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 EZH1Q92800 747 aaPredicted RBP12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 HVCN1Q96D96 273 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 SCLT1Q96NL6 688 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 SAMD11Q96NU1 681 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 STK33Q9BYT3 514 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 TXLNGYQ9BZA5 131 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 ZHX3Q9H4I2 956 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 TBC1D7Q9P0N9 293 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 GCNT4Q9P109 453 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 TRPV2Q9Y5S1 764 aa12.32□□□□□ -0.44
CHRNB1-202ENST00000536404 H3BNC9 293 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 RGS16O15492 202 aaPredicted RBP12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 EDIL3O43854 480 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 MGRN1O60291 552 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 LINC00271P0C7V0 271 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 ATP4AP20648 1035 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 CHRNA3P32297 505 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 PSMC2P35998 433 aaKnown RBP12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 POU5F1Q01860 360 aaKnown RBP12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 GIT2Q14161 759 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 TCEAL1Q15170 157 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 DCAF17Q5H9S7 520 aaPredicted RBP12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 TCERG1LQ5VWI1 586 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 IER5Q5VY09 327 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 DUPD1Q68J44 220 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 SWSAP1Q6NVH7 229 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 DPY19L2P1Q6NXN4 242 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 ARHGAP22Q7Z5H3 698 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 CCDC60Q8IWA6 550 aaPredicted RBP12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 FIBCD1Q8N539 461 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 GBP7Q8N8V2 638 aaPredicted RBP12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 MRPL38Q96DV4 380 aaKnown RBP12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 ROPN1BQ9BZX4 212 aaPredicted RBP12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 UBE2ZQ9H832 354 aaPredicted RBP12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 ROPN1Q9HAT0 212 aaPredicted RBP12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 OLFML3Q9NRN5 406 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 TPX2Q9ULW0 747 aaKnown RBP12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 PCDHGA4Q9Y5G9 962 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 LOXHD1Q8IVV2 1947 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 TTC3P53804 2025 aa12.31□□□□□ -0.44
CHRNB1-202ENST00000536404 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 SMIM35A0A1B0GVV1 85 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 IPO5O00410 1097 aaKnown RBP12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 DDX3XO00571 662 aaKnown RBP eCLIP12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 FGGP02679 453 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 GALCP54803 685 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 TRADDQ15628 312 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 Q4G0T1 1027 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 LRRC23Q53EV4 343 aaPredicted RBP12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 FAM160B1Q5W0V3 765 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 BZW1Q7L1Q6 419 aaKnown RBP12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 DDX42Q86XP3 938 aaKnown RBP eCLIP12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 GPIHBP1Q8IV16 184 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 OR2W6PQ8NHA6 318 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 B4GALNT2Q8NHY0 566 aa12.3□□□□□ -0.44
CHRNB1-202ENST00000536404 SLC30A5Q8TAD4 765 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms