RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 CYLDQ9NQC7 956 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 KANSL3Q9P2N6 904 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 STX18Q9P2W9 335 aaKnown RBP3.92□□□□□ -1.78
MCF2-210ENST00000536274 HACL1Q9UJ83 578 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 PLAGL2Q9UPG8 496 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 ZBTB1Q9Y2K1 713 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 MYH11P35749 1972 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 TAF1P21675 1872 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 TCRBV7S2A1N4TA0A589 114 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 GOLGA8IPA6NC78 632 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 CCDC169A6NNP5 214 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 SPECC1L-ADORA2AF8WAN1 911 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 AGRPO00253 132 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 CDK2AP1O14519 115 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 IRS4O14654 1257 aaPredicted RBP3.92□□□□□ -1.78
MCF2-210ENST00000536274 RIPK2O43353 540 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 TCF3P15923 654 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 CHRNB2P17787 502 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 VCLP18206 1134 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 CD247P20963 164 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 PMLP29590 882 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 CHKAP35790 457 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 PGM1P36871 562 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 RGS2P41220 211 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 FKBP1BP68106 108 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 MRPS9P82933 396 aaKnown RBP3.92□□□□□ -1.78
MCF2-210ENST00000536274 KDSRQ06136 332 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 PEX6Q13608 980 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 TLR1Q15399 786 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 STK11Q15831 433 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 Q3C1V9 767 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 GRAMD1BQ3KR37 738 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 ARL13BQ3SXY8 428 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 CCDC58Q4VC31 144 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 TNNI3KQ59H18 835 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 ARSHQ5FYA8 562 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 PPP6R3Q5H9R7 873 aaPredicted RBP3.92□□□□□ -1.78
MCF2-210ENST00000536274 LDLRAP1Q5SW96 308 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 EGFLAMQ63HQ2 1017 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 SPOPLQ6IQ16 392 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 APOA5Q6Q788 366 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 NLRP9Q7RTR0 991 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 GRAMD2AQ8IUY3 354 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 GOLM1Q8NBJ4 401 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 GSTCDQ8NEC7 633 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 OR6Y1Q8NGX8 325 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 BRSK1Q8TDC3 778 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 LZICQ8WZA0 190 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 PGM2Q96G03 612 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 FAM118BQ9BPY3 351 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 THTPAQ9BU02 230 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 CALN1Q9BXU9 219 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 PUS7LQ9H0K6 701 aaKnown RBP3.92□□□□□ -1.78
MCF2-210ENST00000536274 UCKL1Q9NWZ5 548 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 GPRC5DQ9NZD1 345 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 LARSQ9P2J5 1176 aaKnown RBP3.92□□□□□ -1.78
MCF2-210ENST00000536274 EBF1Q9UH73 591 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 DDX25Q9UHL0 483 aaKnown RBP3.92□□□□□ -1.78
MCF2-210ENST00000536274 FPGT-TNNI3KV9GXZ4 949 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 LINC00854A0A1B0GVQ3 168 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 SH3PXD2BA1X283 911 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 FAM47E-STBD1D6RA91 191 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 H3BRJ5 948 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 TNFRSF10AO00220 468 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 PGRMC1O00264 195 aaKnown RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 O00370 1275 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 TNPO2O14787 897 aaKnown RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 MAPK13O15264 365 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 MGEA5O60502 916 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CHEK2O96017 543 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 AGTP01019 485 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 MMP1P03956 469 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 ENO1P06733 434 aaKnown RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 ABCB4P21439 1286 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 MSX2P35548 267 aaPredicted RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 ETFBP38117 255 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 MAGEA4P43358 317 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 HSD17B4P51659 736 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 AP3M2P53677 418 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CSE1LP55060 971 aaKnown RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 CDH15P55291 814 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 DR1Q01658 176 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 LRRC41Q15345 812 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 NAB2Q15742 525 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 ZNF658Q5TYW1 1059 aaPredicted RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 DCAF12L1Q5VU92 463 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 LLGL2Q6P1M3 1020 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 UGT2A3Q6UWM9 527 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 DCDC5Q6ZRR9 648 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 ZNF662Q6ZS27 426 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CLNKQ7Z7G1 428 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 NOP9Q86U38 636 aaKnown RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 ADSSL1Q8N142 457 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 NUP93Q8N1F7 819 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 DDHD1Q8NEL9 900 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 ANKS1AQ92625 1134 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 HDAC2Q92769 488 aaKnown RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 FAM89AQ96GI7 184 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 COX4I2Q96KJ9 171 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CCDC85AQ96PX6 553 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms