RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 CARNS1A5YM72 827 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 SOWAHDA6NJG2 315 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 FGF18O76093 207 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 OAZ2O95190 189 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 CA3P07451 260 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 MMEP08473 750 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 PAEPP09466 180 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 CD19P15391 556 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 PTPN1P18031 435 aaKnown RBP12.27□□□□□ -0.45
CDCA3-206ENST00000536241 TNFAIP3P21580 790 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 FECHP22830 423 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 BRD2P25440 801 aaKnown RBP12.27□□□□□ -0.45
CDCA3-206ENST00000536241 GNA15P30679 374 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 CCZ1BP86790 482 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 CCZ1P86791 482 aaPredicted RBP12.27□□□□□ -0.45
CDCA3-206ENST00000536241 CDK17Q00537 523 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 MLLT1Q03111 559 aaPredicted RBP12.27□□□□□ -0.45
CDCA3-206ENST00000536241 KRT17Q04695 432 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 MRPL58Q14197 206 aaKnown RBP12.27□□□□□ -0.45
CDCA3-206ENST00000536241 USP41Q3LFD5 358 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 VARS2Q5ST30 1063 aaKnown RBP12.27□□□□□ -0.45
CDCA3-206ENST00000536241 TAF3Q5VWG9 929 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 DDX53Q86TM3 631 aaKnown RBP12.27□□□□□ -0.45
CDCA3-206ENST00000536241 TMTC1Q8IUR5 882 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 RNF168Q8IYW5 571 aaPredicted RBP12.27□□□□□ -0.45
CDCA3-206ENST00000536241 EPS8L1Q8TE68 723 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 SLC20A1Q8WUM9 679 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 DDX1Q92499 740 aaKnown RBP12.27□□□□□ -0.45
CDCA3-206ENST00000536241 TMEM209Q96SK2 561 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 AGPAT1Q99943 283 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 ZSWIM1Q9BR11 485 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 C17orf80Q9BSJ5 609 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 TTPALQ9BTX7 342 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.27□□□□□ -0.45
CDCA3-206ENST00000536241 PBX4Q9BYU1 374 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 KCNF1Q9H3M0 494 aa12.27□□□□□ -0.45
CDCA3-206ENST00000536241 NOCTQ9UK39 431 aaKnown RBP12.27□□□□□ -0.45
CDCA3-206ENST00000536241 THAP12O43422 761 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 SOD2P04179 222 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 CFHP08603 1231 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 VDRP11473 427 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 CHRNB2P17787 502 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 PPM1AP35813 382 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 PDE6CP51160 858 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 PSMC1P62191 440 aaKnown RBP12.26□□□□□ -0.45
CDCA3-206ENST00000536241 PLCB3Q01970 1234 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 MAPK8IP2Q13387 824 aaPredicted RBP12.26□□□□□ -0.45
CDCA3-206ENST00000536241 MTF1Q14872 753 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 RTP2Q5QGT7 225 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 SMYD5Q6GMV2 418 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 KIAA1841Q6NSI8 718 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 PRSS55Q6UWB4 352 aaPredicted RBP12.26□□□□□ -0.45
CDCA3-206ENST00000536241 RAD9BQ6WBX8 426 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 CHRDL2Q6WN34 429 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.26□□□□□ -0.45
CDCA3-206ENST00000536241 LRRTM3Q86VH5 581 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 TDHQ8IZJ6 230 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 VPS52Q8N1B4 723 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 SPATA18Q8TC71 538 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 TNIP3Q96KP6 325 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 CCDC42Q96M95 316 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 ACBD6Q9BR61 282 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 ALG13Q9NP73 1137 aaKnown RBP12.26□□□□□ -0.45
CDCA3-206ENST00000536241 CRTAC1Q9NQ79 661 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 CHST7Q9NS84 486 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 ADAMTS1Q9UHI8 967 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 GTF3C4Q9UKN8 822 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 CDH9Q9ULB4 789 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 MTUS1Q9ULD2 1270 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 KIAA1257Q9ULG3 409 aa12.26□□□□□ -0.45
CDCA3-206ENST00000536241 SSU72P8A0A1W2PR75 194 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 MYBPHLA2RUH7 354 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 C2CD2LO14523 706 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 PCSK1P29120 753 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 CTNNB1P35222 781 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 TAP1Q03518 808 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 CNGA2Q16280 664 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 CCDC142Q17RM4 750 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 ASTE1Q2TB18 679 aaPredicted RBP12.25□□□□□ -0.45
CDCA3-206ENST00000536241 CTXN3Q4LDR2 81 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 SGO2Q562F6 1265 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 PPP1R26Q5T8A7 1209 aaPredicted RBP12.25□□□□□ -0.45
CDCA3-206ENST00000536241 GLYCTKQ8IVS8 523 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 B3GALNT2Q8NCR0 500 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 CCDC112Q8NEF3 446 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 OR10T2Q8NGX3 314 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 LNX1Q8TBB1 728 aaPredicted RBP12.25□□□□□ -0.45
CDCA3-206ENST00000536241 RIN2Q8WYP3 895 aaPredicted RBP12.25□□□□□ -0.45
CDCA3-206ENST00000536241 CYFIP2Q96F07 1278 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 PCDHB18PQ96TA0 734 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 SYT15Q9BQS2 421 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 SYT11Q9BT88 431 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 NKX2-4Q9H2Z4 354 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 DEF6Q9H4E7 631 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 FAM49BQ9NUQ9 324 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 MSRAQ9UJ68 235 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 RWDD3Q9Y3V2 267 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 EPN1Q9Y6I3 576 aaPredicted RBP12.25□□□□□ -0.45
CDCA3-206ENST00000536241 VWA8A3KMH1 1905 aa12.25□□□□□ -0.45
CDCA3-206ENST00000536241 A0A087X0T9 212 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms