RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 NECTIN4Q96NY8 510 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 POMKQ9H5K3 350 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 SH2D4AQ9H788 454 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 TBC1D17Q9HA65 648 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 MRS2Q9HD23 443 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 FBXO28Q9NVF7 368 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 HSPBP1Q9NZL4 362 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 LRP2BPQ9P2M1 347 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 SERPINB13Q9UIV8 391 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 MYH3P11055 1940 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 EMSYQ7Z589 1322 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 RAD50Q92878 1312 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 SMG1Q96Q15 3661 aaKnown RBP4.7□□□□□ -1.66
YBX3-205ENST00000536107 NBEAQ8NFP9 2946 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 EYA2O00167 538 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 PPM1BO75688 479 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 KCNK5O95279 499 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 WEE2P0C1S8 567 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 HOXB8P17481 243 aaPredicted RBP4.7□□□□□ -1.66
YBX3-205ENST00000536107 KRT4P19013 534 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 FPR2P25090 351 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 DNAJB1P25685 340 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 CALD1Q05682 793 aaKnown RBP4.7□□□□□ -1.66
YBX3-205ENST00000536107 RASGRF1Q13972 1273 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 CAMK1Q14012 370 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 ZNF528Q3MIS6 628 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 KIAA1755Q5JYT7 1200 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 ZNF618Q5T7W0 954 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 HEATR6Q6AI08 1181 aaKnown RBP4.7□□□□□ -1.66
YBX3-205ENST00000536107 TATDN1Q6P1N9 297 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 SLC4A10Q6U841 1118 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 GLCCI1Q86VQ1 547 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 ULK2Q8IYT8 1036 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 SPPL3Q8TCT6 385 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 ATP8B4Q8TF62 1192 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 NSUN4Q96CB9 384 aaKnown RBP4.7□□□□□ -1.66
YBX3-205ENST00000536107 BBC3Q96PG8 261 aaPredicted RBP4.7□□□□□ -1.66
YBX3-205ENST00000536107 CDCA3Q99618 268 aaPredicted RBP4.7□□□□□ -1.66
YBX3-205ENST00000536107 LSM14BQ9BX40 385 aaKnown RBP4.7□□□□□ -1.66
YBX3-205ENST00000536107 KATNBL1Q9H079 304 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 S1PR5Q9H228 398 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 EPC1Q9H2F5 836 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 ZNF703Q9H7S9 590 aaPredicted RBP4.7□□□□□ -1.66
YBX3-205ENST00000536107 HOMER2Q9NSB8 354 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 SEMA4GQ9NTN9 838 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 IFT57Q9NWB7 429 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 ZSCAN32Q9NX65 697 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 CDH22Q9UJ99 828 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 SRPK3Q9UPE1 567 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 RIPK3Q9Y572 518 aa4.7□□□□□ -1.66
YBX3-205ENST00000536107 CDK5RAP2Q96SN8 1893 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 TCRBV5S2A0A599 114 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 RSPH10B2B2RC85 870 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 HGSO14964 777 aaPredicted RBP4.69□□□□□ -1.66
YBX3-205ENST00000536107 ZBED4O75132 1171 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 PRB1P04280 392 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 ITGB1P05556 798 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 RETP07949 1114 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 RSPH10BP0C881 870 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 PLA2G2AP14555 144 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 BMP5P22003 454 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 ADORA1P30542 326 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 THPOP40225 353 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 MTHFRP42898 656 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 CNTN2Q02246 1040 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 DUSP28Q4G0W2 176 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 SPOUT1Q5T280 376 aaKnown RBP4.69□□□□□ -1.66
YBX3-205ENST00000536107 BEND3Q5T5X7 828 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 LAIR1Q6GTX8 287 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 NAA16Q6N069 864 aaPredicted RBP4.69□□□□□ -1.66
YBX3-205ENST00000536107 XRRA1Q6P2D8 792 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 SYCE2Q6PIF2 218 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 TMC5Q6UXY8 1006 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 ADAT2Q7Z6V5 191 aaKnown RBP4.69□□□□□ -1.66
YBX3-205ENST00000536107 REXO1L1PQ8IX06 675 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 TSPYL6Q8N831 410 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 C7orf31Q8N865 590 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 RBBP8NLQ8NC74 664 aaPredicted RBP4.69□□□□□ -1.66
YBX3-205ENST00000536107 VN1R2Q8NFZ6 395 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 ZNF384Q8TF68 577 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 RUNDC1Q96C34 613 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 LRIG1Q96JA1 1093 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 WDR11Q9BZH6 1224 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 BICC1Q9H694 974 aaKnown RBP4.69□□□□□ -1.66
YBX3-205ENST00000536107 CYP26B1Q9NR63 512 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 AURKAIP1Q9NWT8 199 aaPredicted RBP4.69□□□□□ -1.66
YBX3-205ENST00000536107 WNT16Q9UBV4 365 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 FBXO40Q9UH90 709 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 FBXO4Q9UKT5 387 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 DUSP12Q9UNI6 340 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 DDX49Q9Y6V7 483 aaKnown RBP4.69□□□□□ -1.66
YBX3-205ENST00000536107 DLG5Q8TDM6 1919 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 SIP14410 1827 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 DSPP15924 2871 aaKnown RBP4.69□□□□□ -1.66
YBX3-205ENST00000536107 ADGRA3Q8IWK6 1321 aa4.69□□□□□ -1.66
YBX3-205ENST00000536107 SCN5AQ14524 2016 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 IGF2RP11717 2491 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 J3QKU1 62 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 LRP3O75074 770 aa4.68□□□□□ -1.66
YBX3-205ENST00000536107 DNAJA1P31689 397 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms