RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 GIPC2Q8TF65 315 aa14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ZNF560Q96MR9 790 aa14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 MKNK1Q9BUB5 465 aa14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ASB7Q9H672 318 aa14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 KIF9Q9HAQ2 790 aa14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CPSF3Q9UKF6 684 aaKnown RBP14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 TPRP12270 2363 aaKnown RBP14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 A0A0B4J269 797 aa14.01□□□□□ -0.17
TNFRSF1A-207ENST00000535958 RPP40O75818 363 aaKnown RBP14.01□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CYP11A1P05108 521 aa14.01□□□□□ -0.17
TNFRSF1A-207ENST00000535958 DDX6P26196 483 aaKnown RBP eCLIP14.01□□□□□ -0.17
TNFRSF1A-207ENST00000535958 WEE1P30291 646 aa14.01□□□□□ -0.17
TNFRSF1A-207ENST00000535958 TSPY1Q01534 308 aa14.01□□□□□ -0.17
TNFRSF1A-207ENST00000535958 SV2CQ496J9 727 aa14.01□□□□□ -0.17
TNFRSF1A-207ENST00000535958 SLFN12LQ6IEE8 588 aa14.01□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CACNA2D4Q7Z3S7 1137 aa14.01□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CMTM8Q8IZV2 173 aa14.01□□□□□ -0.17
TNFRSF1A-207ENST00000535958 MRPS31Q92665 395 aaKnown RBP14.01□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ZCWPW1Q9H0M4 648 aa14.01□□□□□ -0.17
TNFRSF1A-207ENST00000535958 SMG9Q9H0W8 520 aaKnown RBP14.01□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ARRDC1-AS1Q9H2J1 176 aa14.01□□□□□ -0.17
TNFRSF1A-207ENST00000535958 C2CD2Q9Y426 696 aa14.01□□□□□ -0.17
TNFRSF1A-207ENST00000535958 TCHHQ07283 1943 aa14.01□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ACACBO00763 2458 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 PIRO00625 290 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 AXIN1O15169 862 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 FAM189A1O60320 539 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 GDF9O60383 454 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 KRT37O76014 449 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 BMP15O95972 392 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ATF6P18850 670 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 HOXA6P31267 233 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ACOT2P49753 483 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CDR1P51861 262 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 RUNX3Q13761 415 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ARSHQ5FYA8 562 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 KRI1Q8N9T8 703 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 TTC16Q8NEE8 873 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 GAB3Q8WWW8 586 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 KCNN1Q92952 543 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 LOXL4Q96JB6 756 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 LRRC3BQ96PB8 259 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 GKN1Q9NS71 199 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 DPP3Q9NY33 737 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 AGO2Q9UKV8 859 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 MAGED2Q9UNF1 606 aaPredicted RBP14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 PCDHB5Q9Y5E4 795 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 EPG5Q9HCE0 2579 aa14□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CCDC163A0A0D9SF12 145 aa13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 EXTL3O43909 919 aa13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ADRB2P07550 413 aa13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 PLCG1P19174 1290 aa13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 GJB2P29033 226 aa13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 PNPLA4P41247 253 aa13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 PXNP49023 591 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ZNF131P52739 623 aa13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 NFE2Q16621 373 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CPA6Q8N4T0 437 aa13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 MAB21L3Q8N8X9 362 aa13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 POMGNT1Q8WZA1 660 aa13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 LARP4BQ92615 738 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 RAD54LQ92698 747 aa13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 EBF3Q9H4W6 596 aa13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 UXTQ9UBK9 157 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 R3HCC1Q9Y3T6 440 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 KIF26AQ9ULI4 1882 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ANK1P16157 1881 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ANO9A1A5B4 782 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 KPNA7A9QM74 516 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 RNF40O75150 1001 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 PRPF40AO75400 957 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 EPN2O95208 641 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 IL18RAPO95256 599 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CSH1P0DML2 217 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CSH2P0DML3 217 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 HAPLN1P10915 354 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 DRD1P21728 446 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 NMT1P30419 496 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 LONP1P36776 959 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 GTF2BQ00403 316 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 MCM6Q14566 821 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 KARSQ15046 597 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 RABEP1Q15276 862 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 SF3A2Q15428 464 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 TMEM196Q5HYL7 178 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 WDR44Q5JSH3 913 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ERICH6BQ5W0A0 696 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 WSCD1Q658N2 575 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 TRIM68Q6AZZ1 485 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 SLC39A4Q6P5W5 647 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 NT5DC4Q86YG4 428 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 SLC46A2Q9BY10 475 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 IL21Q9HBE4 155 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 TRPC7Q9HCX4 862 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 TDP1Q9NUW8 608 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 C2orf42Q9NWW7 574 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ANGPTL2Q9UKU9 493 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 EXOC7Q9UPT5 735 aa13.98□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ZNF638Q14966 1978 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 HUS1O60921 280 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms