RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 H0Y858 1186 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 CYB561D2O14569 222 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 PRPF6O94906 941 aaKnown RBP11.64□□□□□ -0.55
CCDC60-202ENST00000535685 FGF19O95750 216 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 OR4Q2P0C623 313 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 WEE1P30291 646 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 ALDH1A3P47895 512 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 TUFMP49411 452 aaKnown RBP11.64□□□□□ -0.55
CCDC60-202ENST00000535685 EPHB3P54753 998 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 WNT7BP56706 349 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 DUSP4Q13115 394 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 SURF1Q15526 300 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 MLF2Q15773 248 aaPredicted RBP11.64□□□□□ -0.55
CCDC60-202ENST00000535685 SLC44A4Q53GD3 710 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 RESP18Q5W5W9 173 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 TANGO2Q6ICL3 276 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 UNC13DQ70J99 1090 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 METTL23Q86XA0 190 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 TMC8Q8IU68 726 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 THEM5Q8N1Q8 247 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 GPD1LQ8N335 351 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 C1orf127Q8N9H9 656 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 OR10T2Q8NGX3 314 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 ING5Q8WYH8 240 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 DNASE1L2Q92874 299 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 SMARCD2Q92925 531 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 PSMG2Q969U7 264 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 E2F7Q96AV8 911 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 DHX58Q96C10 678 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 CBWD1Q9BRT8 395 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 KIAA1586Q9HCI6 787 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 ZFP14Q9HCL3 533 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 GDAP2Q9NXN4 497 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 RBAKQ9NYW8 714 aaPredicted RBP11.64□□□□□ -0.55
CCDC60-202ENST00000535685 ITGA11Q9UKX5 1188 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 PCDHA7Q9UN72 937 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 SIT1Q9Y3P8 196 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 USP34Q70CQ2 3546 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 TICRRQ7Z2Z1 1910 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 ZNF292O60281 2723 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 KIF26AQ9ULI4 1882 aaPredicted RBP11.63□□□□□ -0.55
CCDC60-202ENST00000535685 KANSL1LA0AUZ9 987 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 NRG2O14511 850 aaPredicted RBP11.63□□□□□ -0.55
CCDC60-202ENST00000535685 HSP90AA1P07900 732 aaKnown RBP11.63□□□□□ -0.55
CCDC60-202ENST00000535685 HOXD13P35453 343 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 MAGEA9P43362 315 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 MLLT6P55198 1093 aaPredicted RBP11.63□□□□□ -0.55
CCDC60-202ENST00000535685 ASIC1P78348 528 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 BMT2Q1RMZ1 405 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 FAM78AQ5JUQ0 283 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 WSCD1Q658N2 575 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 LIMS2Q7Z4I7 341 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 ITIH5Q86UX2 942 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 TMEM86AQ8N2M4 240 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 ATAD1Q8NBU5 361 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 ZSWIM2Q8NEG5 633 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 PJA1Q8NG27 643 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 SHKBP1Q8TBC3 707 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 SPPL2BQ8TCT7 592 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 DEPDC1BQ8WUY9 529 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 LEO1Q8WVC0 666 aaPredicted RBP11.63□□□□□ -0.55
CCDC60-202ENST00000535685 SAAL1Q96ER3 474 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 TMEM209Q96SK2 561 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 NELL2Q99435 816 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 KXD1Q9BQD3 176 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 PLA2G2FQ9BZM2 168 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 CGNQ9P2M7 1197 aaKnown RBP11.63□□□□□ -0.55
CCDC60-202ENST00000535685 ZMYM5Q9UJ78 669 aa11.63□□□□□ -0.55
CCDC60-202ENST00000535685 ZNF233A6NK53 670 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 SOBPA7XYQ1 873 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 ARHGAP33O14559 1287 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 POLR2DO15514 142 aaKnown RBP11.62□□□□□ -0.55
CCDC60-202ENST00000535685 FAM163BP0C2L3 166 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 GLULP15104 373 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 RBP5P82980 135 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 TFAMQ00059 246 aaKnown RBP11.62□□□□□ -0.55
CCDC60-202ENST00000535685 ANGPT1Q15389 498 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 FAM26FQ5R3K3 315 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 DPH6Q7L8W6 267 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 DNAJB7Q7Z6W7 309 aaPredicted RBP11.62□□□□□ -0.55
CCDC60-202ENST00000535685 LRRTM3Q86VH5 581 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 MFSD6LQ8IWD5 586 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 C12orf56Q8IXR9 622 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 DCP1BQ8IZD4 617 aaKnown RBP11.62□□□□□ -0.55
CCDC60-202ENST00000535685 GLIS3Q8NEA6 775 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 TMEM174Q8WUU8 243 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 CLDN23Q96B33 292 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 ZSWIM3Q96MP5 696 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 PGLYRP2Q96PD5 576 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 ACBD6Q9BR61 282 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 SEMA4AQ9H3S1 761 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 PDE11AQ9HCR9 933 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 INTS13Q9NVM9 706 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 OBP2AQ9NY56 170 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 FAM13BQ9NYF5 915 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 SIX4Q9UIU6 781 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 CFAP54Q96N23 3096 aa11.62□□□□□ -0.55
CCDC60-202ENST00000535685 GOLGA8IPA6NC78 632 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 SHISA7A6NL88 538 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 GOLGA8JA6NMD2 632 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms