RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 TSC2P49815 1807 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 MTMR11A4FU01 709 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 PAPLNO95428 1278 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 GNA14O95837 355 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 TRIM49P0CI25 452 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 TRIM49CP0CI26 452 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 GCLMP48507 274 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 TWF1Q12792 350 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 DUSP4Q13115 394 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 TPD52L1Q16890 204 aaPredicted RBP23.41■■□□□ 1.34
SSPN-204ENST00000535504 SOWAHAQ2M3V2 549 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 INTS6LQ5JSJ4 861 aaKnown RBP23.41■■□□□ 1.34
SSPN-204ENST00000535504 CYP4A22Q5TCH4 519 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 C4orf50Q6ZRC1 276 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 ITIH5Q86UX2 942 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 MLKLQ8NB16 471 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 OR6B3Q8NGW1 331 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 EEF2KMTQ96G04 330 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 SEPT5Q99719 369 aaPredicted RBP23.41■■□□□ 1.34
SSPN-204ENST00000535504 ABI2Q9NYB9 513 aaPredicted RBP23.41■■□□□ 1.34
SSPN-204ENST00000535504 CDH9Q9ULB4 789 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 YIPF1Q9Y548 306 aa23.41■■□□□ 1.34
SSPN-204ENST00000535504 ZFP37Q9Y6Q3 630 aaPredicted RBP23.41■■□□□ 1.34
SSPN-204ENST00000535504 ZNF197O14709 1029 aa23.4■■□□□ 1.34
SSPN-204ENST00000535504 TACC1O75410 805 aa23.4■■□□□ 1.34
SSPN-204ENST00000535504 WARSP23381 471 aaKnown RBP23.4■■□□□ 1.34
SSPN-204ENST00000535504 GNL1P36915 607 aaPredicted RBP23.4■■□□□ 1.34
SSPN-204ENST00000535504 MXI1P50539 228 aa23.4■■□□□ 1.34
SSPN-204ENST00000535504 CETN1Q12798 172 aa23.4■■□□□ 1.34
SSPN-204ENST00000535504 FILIP1Q7Z7B0 1213 aa23.4■■□□□ 1.34
SSPN-204ENST00000535504 SPATA2LQ8IUW3 424 aaPredicted RBP23.4■■□□□ 1.34
SSPN-204ENST00000535504 VRTNQ9H8Y1 702 aa23.4■■□□□ 1.34
SSPN-204ENST00000535504 ASB3Q9Y575 518 aa23.4■■□□□ 1.34
SSPN-204ENST00000535504 C2CD4DB7Z1M9 353 aa23.39■■□□□ 1.33
SSPN-204ENST00000535504 PPP1R3GB7ZBB8 358 aa23.39■■□□□ 1.33
SSPN-204ENST00000535504 SEC24AO95486 1093 aa23.39■■□□□ 1.33
SSPN-204ENST00000535504 HLA-DRAP01903 254 aa23.39■■□□□ 1.33
SSPN-204ENST00000535504 PMS1P54277 932 aaKnown RBP23.39■■□□□ 1.33
SSPN-204ENST00000535504 WDR44Q5JSH3 913 aa23.39■■□□□ 1.33
SSPN-204ENST00000535504 PDZD4Q76G19 769 aaPredicted RBP23.39■■□□□ 1.33
SSPN-204ENST00000535504 FRMD5Q7Z6J6 570 aa23.39■■□□□ 1.33
SSPN-204ENST00000535504 RNF135Q8IUD6 432 aa23.39■■□□□ 1.33
SSPN-204ENST00000535504 ZDHHC14Q8IZN3 488 aa23.39■■□□□ 1.33
SSPN-204ENST00000535504 ATAD1Q8NBU5 361 aa23.39■■□□□ 1.33
SSPN-204ENST00000535504 TMEM209Q96SK2 561 aa23.39■■□□□ 1.33
SSPN-204ENST00000535504 SYT15Q9BQS2 421 aa23.39■■□□□ 1.33
SSPN-204ENST00000535504 CORO1BQ9BR76 489 aa23.39■■□□□ 1.33
SSPN-204ENST00000535504 GZF1Q9H116 711 aaPredicted RBP23.39■■□□□ 1.33
SSPN-204ENST00000535504 ASAH2Q9NR71 780 aa23.39■■□□□ 1.33
SSPN-204ENST00000535504 MRPS23Q9Y3D9 190 aaKnown RBP23.39■■□□□ 1.33
SSPN-204ENST00000535504 C2orf16Q68DN1 1984 aa23.39■■□□□ 1.33
SSPN-204ENST00000535504 XIRP2A4UGR9 3374 aa23.39■■□□□ 1.33
SSPN-204ENST00000535504 GABRDO14764 452 aa23.38■■□□□ 1.33
SSPN-204ENST00000535504 N4BP1O75113 896 aaKnown RBP23.38■■□□□ 1.33
SSPN-204ENST00000535504 CCDC192P0DO97 292 aa23.38■■□□□ 1.33
SSPN-204ENST00000535504 CD44P16070 742 aaKnown RBP23.38■■□□□ 1.33
SSPN-204ENST00000535504 ACAT1P24752 427 aaKnown RBP23.38■■□□□ 1.33
SSPN-204ENST00000535504 STX17P56962 302 aa23.38■■□□□ 1.33
SSPN-204ENST00000535504 ZC3H3Q8IXZ2 948 aaKnown RBP23.38■■□□□ 1.33
SSPN-204ENST00000535504 RWDD2AQ9UIY3 292 aa23.38■■□□□ 1.33
SSPN-204ENST00000535504 A8MXQ7 604 aa23.37■■□□□ 1.33
SSPN-204ENST00000535504 DCXO43602 365 aa23.37■■□□□ 1.33
SSPN-204ENST00000535504 FGF19O95750 216 aa23.37■■□□□ 1.33
SSPN-204ENST00000535504 RHOP08100 348 aa23.37■■□□□ 1.33
SSPN-204ENST00000535504 RPL10AP62906 217 aaKnown RBP23.37■■□□□ 1.33
SSPN-204ENST00000535504 SCARA5Q6ZMJ2 495 aa23.37■■□□□ 1.33
SSPN-204ENST00000535504 FBXL13Q8NEE6 735 aa23.37■■□□□ 1.33
SSPN-204ENST00000535504 TNIP3Q96KP6 325 aa23.37■■□□□ 1.33
SSPN-204ENST00000535504 GCNAQ96QF7 691 aa23.37■■□□□ 1.33
SSPN-204ENST00000535504 RTP3Q9BQQ7 232 aa23.37■■□□□ 1.33
SSPN-204ENST00000535504 XYLT2Q9H1B5 865 aa23.37■■□□□ 1.33
SSPN-204ENST00000535504 ABCB6Q9NP58 842 aa23.37■■□□□ 1.33
SSPN-204ENST00000535504 SLC27A5Q9Y2P5 690 aa23.37■■□□□ 1.33
SSPN-204ENST00000535504 CUL9Q8IWT3 2517 aa23.37■■□□□ 1.33
SSPN-204ENST00000535504 ATP8B3O60423 1300 aa23.36■■□□□ 1.33
SSPN-204ENST00000535504 VNN1O95497 513 aa23.36■■□□□ 1.33
SSPN-204ENST00000535504 PDGFRBP09619 1106 aa23.36■■□□□ 1.33
SSPN-204ENST00000535504 BMP6P22004 513 aa23.36■■□□□ 1.33
SSPN-204ENST00000535504 PPP3CAQ08209 521 aa23.36■■□□□ 1.33
SSPN-204ENST00000535504 TTI2Q6NXR4 508 aa23.36■■□□□ 1.33
SSPN-204ENST00000535504 OSTM1Q86WC4 334 aa23.36■■□□□ 1.33
SSPN-204ENST00000535504 CREBRFQ8IUR6 639 aa23.36■■□□□ 1.33
SSPN-204ENST00000535504 FUBP3Q96I24 572 aaKnown RBP eCLIP23.36■■□□□ 1.33
SSPN-204ENST00000535504 DNMT3BQ9UBC3 853 aaKnown RBP23.36■■□□□ 1.33
SSPN-204ENST00000535504 MAGEC2Q9UBF1 373 aaPredicted RBP23.36■■□□□ 1.33
SSPN-204ENST00000535504 A0A0C4DFX4 3053 aa23.35■■□□□ 1.33
SSPN-204ENST00000535504 DENND4AQ7Z401 1863 aa23.35■■□□□ 1.33
SSPN-204ENST00000535504 ASS1P00966 412 aaKnown RBP23.35■■□□□ 1.33
SSPN-204ENST00000535504 ANXA13P27216 316 aa23.35■■□□□ 1.33
SSPN-204ENST00000535504 NOP14P78316 857 aaKnown RBP23.35■■□□□ 1.33
SSPN-204ENST00000535504 TTC39CQ8N584 583 aa23.35■■□□□ 1.33
SSPN-204ENST00000535504 KBTBD7Q8WVZ9 684 aa23.35■■□□□ 1.33
SSPN-204ENST00000535504 MRPL45Q9BRJ2 306 aaKnown RBP23.35■■□□□ 1.33
SSPN-204ENST00000535504 PI4K2AQ9BTU6 479 aa23.35■■□□□ 1.33
SSPN-204ENST00000535504 SRRTQ9BXP5 876 aaKnown RBP23.35■■□□□ 1.33
SSPN-204ENST00000535504 CD320Q9NPF0 282 aa23.35■■□□□ 1.33
SSPN-204ENST00000535504 AVENQ9NQS1 362 aaPredicted RBP23.35■■□□□ 1.33
SSPN-204ENST00000535504 IGSF9Q9P2J2 1179 aa23.35■■□□□ 1.33
SSPN-204ENST00000535504 GTF3C4Q9UKN8 822 aa23.35■■□□□ 1.33
SSPN-204ENST00000535504 CDH7Q9ULB5 785 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms