RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 OXCT2Q9BYC2 517 aaPredicted RBP11.72□□□□□ -0.53
VAMP1-204ENST00000535180 ZSWIM4Q9H7M6 989 aa11.72□□□□□ -0.53
VAMP1-204ENST00000535180 KIF9Q9HAQ2 790 aa11.72□□□□□ -0.53
VAMP1-204ENST00000535180 TDP1Q9NUW8 608 aa11.72□□□□□ -0.53
VAMP1-204ENST00000535180 SLC38A7Q9NVC3 462 aa11.72□□□□□ -0.53
VAMP1-204ENST00000535180 DAXXQ9UER7 740 aaPredicted RBP11.72□□□□□ -0.53
VAMP1-204ENST00000535180 DNMT3LQ9UJW3 386 aa11.72□□□□□ -0.53
VAMP1-204ENST00000535180 VAV3Q9UKW4 847 aa11.72□□□□□ -0.53
VAMP1-204ENST00000535180 BRPF3Q9ULD4 1205 aa11.72□□□□□ -0.53
VAMP1-204ENST00000535180 SLC27A5Q9Y2P5 690 aa11.72□□□□□ -0.53
VAMP1-204ENST00000535180 RBM8AQ9Y5S9 174 aaKnown RBP11.72□□□□□ -0.53
VAMP1-204ENST00000535180 ANAPC1Q9H1A4 1944 aa11.72□□□□□ -0.53
VAMP1-204ENST00000535180 FAM149AA5PLN7 773 aa11.71□□□□□ -0.53
VAMP1-204ENST00000535180 LRRIQ4A6NIV6 560 aa11.71□□□□□ -0.53
VAMP1-204ENST00000535180 RRP8O43159 456 aaKnown RBP11.71□□□□□ -0.53
VAMP1-204ENST00000535180 ATXN1LP0C7T5 689 aaKnown RBP11.71□□□□□ -0.53
VAMP1-204ENST00000535180 HLA-EP13747 358 aa11.71□□□□□ -0.53
VAMP1-204ENST00000535180 RPL9P32969 192 aaKnown RBP11.71□□□□□ -0.53
VAMP1-204ENST00000535180 SEC13P55735 322 aa11.71□□□□□ -0.53
VAMP1-204ENST00000535180 RPL6Q02878 288 aaKnown RBP11.71□□□□□ -0.53
VAMP1-204ENST00000535180 BFSP1Q12934 665 aa11.71□□□□□ -0.53
VAMP1-204ENST00000535180 GPR17Q13304 367 aa11.71□□□□□ -0.53
VAMP1-204ENST00000535180 PRPF4BQ13523 1007 aaKnown RBP11.71□□□□□ -0.53
VAMP1-204ENST00000535180 EPHA7Q15375 998 aa11.71□□□□□ -0.53
VAMP1-204ENST00000535180 TMEM132AQ24JP5 1023 aa11.71□□□□□ -0.53
VAMP1-204ENST00000535180 TAF1BQ53T94 588 aaPredicted RBP11.71□□□□□ -0.53
VAMP1-204ENST00000535180 CDCA2Q69YH5 1023 aaPredicted RBP11.71□□□□□ -0.53
VAMP1-204ENST00000535180 B4GALNT3Q6L9W6 998 aa11.71□□□□□ -0.53
VAMP1-204ENST00000535180 MOXD1Q6UVY6 613 aa11.71□□□□□ -0.53
VAMP1-204ENST00000535180 CHD1LQ86WJ1 897 aa11.71□□□□□ -0.53
VAMP1-204ENST00000535180 DEFB119Q8N690 84 aa11.71□□□□□ -0.53
VAMP1-204ENST00000535180 BAHD1Q8TBE0 780 aaPredicted RBP11.71□□□□□ -0.53
VAMP1-204ENST00000535180 SETD7Q8WTS6 366 aaKnown RBP11.71□□□□□ -0.53
VAMP1-204ENST00000535180 GCNAQ96QF7 691 aa11.71□□□□□ -0.53
VAMP1-204ENST00000535180 IL21Q9HBE4 155 aa11.71□□□□□ -0.53
VAMP1-204ENST00000535180 RGL1Q9NZL6 768 aa11.71□□□□□ -0.53
VAMP1-204ENST00000535180 BCCIPQ9P287 314 aaKnown RBP eCLIP11.71□□□□□ -0.53
VAMP1-204ENST00000535180 TMEM131Q92545 1883 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 ANTXRLA6NF34 631 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 GOLGA8AA7E2F4 631 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 GOLGA8BA8MQT2 603 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 TLX3O43711 291 aaPredicted RBP11.7□□□□□ -0.54
VAMP1-204ENST00000535180 OAZ2O95190 189 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 OR4Q2P0C623 313 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 MCM4P33991 863 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 CSRP3P50461 194 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 MRPS21P82921 87 aaKnown RBP11.7□□□□□ -0.54
VAMP1-204ENST00000535180 CTTNQ14247 550 aaKnown RBP11.7□□□□□ -0.54
VAMP1-204ENST00000535180 SMAD1Q15797 465 aaKnown RBP11.7□□□□□ -0.54
VAMP1-204ENST00000535180 PLEKHG6Q3KR16 790 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 DCAF4L1Q3SXM0 396 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 XKR4Q5GH76 650 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 EEF1DP3Q658K8 133 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 ALKAL1Q6UXT8 129 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 SLC36A4Q6YBV0 504 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 ZBTB8OSQ8IWT0 167 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 CCDC148Q8NFR7 591 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 RIN3Q8TB24 985 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 PNMA5Q96PV4 448 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 C22orf23Q9BZE7 217 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 POLR3FQ9H1D9 316 aaPredicted RBP11.7□□□□□ -0.54
VAMP1-204ENST00000535180 PCDHB8Q9UN66 801 aa11.7□□□□□ -0.54
VAMP1-204ENST00000535180 AHCTF1Q8WYP5 2266 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 ACKR2O00590 384 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 SGSM2O43147 1006 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 PRPF3O43395 683 aaKnown RBP11.69□□□□□ -0.54
VAMP1-204ENST00000535180 CHMLP26374 656 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 MARCKSP29966 332 aaPredicted RBP11.69□□□□□ -0.54
VAMP1-204ENST00000535180 ADD1P35611 737 aaKnown RBP11.69□□□□□ -0.54
VAMP1-204ENST00000535180 YWHAHQ04917 246 aaPredicted RBP11.69□□□□□ -0.54
VAMP1-204ENST00000535180 COLEC12Q5KU26 742 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 PPP4R3AQ6IN85 833 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 SMC5Q8IY18 1101 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 PGBD3Q8N328 593 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 MAB21L3Q8N8X9 362 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 SPRYD3Q8NCJ5 442 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 OSCP1Q8WVF1 389 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 HMGB4Q8WW32 186 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 ATP2A3Q93084 1043 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 NXPE2Q96DL1 559 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 DYDC2Q96IM9 177 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 FAM20AQ96MK3 541 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 CDC6Q99741 560 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 ZDHHC5Q9C0B5 715 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 FAM124BQ9H5Z6 455 aaPredicted RBP11.69□□□□□ -0.54
VAMP1-204ENST00000535180 DUS2Q9NX74 493 aaKnown RBP11.69□□□□□ -0.54
VAMP1-204ENST00000535180 HSFX1Q9UBD0 423 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 DDX25Q9UHL0 483 aaKnown RBP11.69□□□□□ -0.54
VAMP1-204ENST00000535180 USP20Q9Y2K6 914 aa11.69□□□□□ -0.54
VAMP1-204ENST00000535180 ANKRD17O75179 2603 aaKnown RBP11.68□□□□□ -0.54
VAMP1-204ENST00000535180 MTMR11A4FU01 709 aa11.68□□□□□ -0.54
VAMP1-204ENST00000535180 SGK1O00141 431 aa11.68□□□□□ -0.54
VAMP1-204ENST00000535180 PLK4O00444 970 aa11.68□□□□□ -0.54
VAMP1-204ENST00000535180 SLC28A2O43868 658 aa11.68□□□□□ -0.54
VAMP1-204ENST00000535180 SOAT2O75908 522 aa11.68□□□□□ -0.54
VAMP1-204ENST00000535180 ZNF883P0CG24 379 aa11.68□□□□□ -0.54
VAMP1-204ENST00000535180 C6P13671 934 aa11.68□□□□□ -0.54
VAMP1-204ENST00000535180 DDX6P26196 483 aaKnown RBP eCLIP11.68□□□□□ -0.54
VAMP1-204ENST00000535180 RCAN1P53805 252 aa11.68□□□□□ -0.54
VAMP1-204ENST00000535180 SCRN1Q12765 414 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms