RNA–Protein interactions for RNA: ENST00000534581.1

C11orf49-222, Transcript of chromosome 11 open reading frame 49, human

TSL 3

Gene C11orf49, Length 542 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C11orf49-222	ENST00000534581	NDST1	P52848	882 aa		18.21	■□□□□ 0.51
C11orf49-222	ENST00000534581	MFAP3	P55082	362 aa		18.21	■□□□□ 0.51
C11orf49-222	ENST00000534581	PSMC1	P62191	440 aa	Known RBP	18.21	■□□□□ 0.51
C11orf49-222	ENST00000534581	ELMSAN1	Q6PJG2	1045 aa		18.21	■□□□□ 0.51
C11orf49-222	ENST00000534581	ARHGEF19	Q8IW93	802 aa		18.21	■□□□□ 0.51
C11orf49-222	ENST00000534581	TTC39C	Q8N584	583 aa		18.21	■□□□□ 0.51
C11orf49-222	ENST00000534581	PGLYRP2	Q96PD5	576 aa		18.21	■□□□□ 0.51
C11orf49-222	ENST00000534581	ZCWPW1	Q9H0M4	648 aa		18.21	■□□□□ 0.51
C11orf49-222	ENST00000534581	CISH	Q9NSE2	258 aa		18.21	■□□□□ 0.51
C11orf49-222	ENST00000534581	CLDND1	Q9NY35	253 aa		18.21	■□□□□ 0.51
C11orf49-222	ENST00000534581	CDH9	Q9ULB4	789 aa		18.21	■□□□□ 0.51
C11orf49-222	ENST00000534581	BARX2	Q9UMQ3	279 aa	Predicted RBP	18.21	■□□□□ 0.51
C11orf49-222	ENST00000534581	STXBP5L	Q9Y2K9	1186 aa		18.21	■□□□□ 0.51
C11orf49-222	ENST00000534581	EPCAM	P16422	314 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	UBASH3A	P57075	661 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	APBA1	Q02410	837 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	KCNMA1	Q12791	1236 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	ORC1	Q13415	861 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	SYCP1	Q15431	976 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	ZNF394	Q53GI3	561 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	INTS6L	Q5JSJ4	861 aa	Known RBP	18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	LIN9	Q5TKA1	542 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	PHLDB3	Q6NSJ2	640 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	GJB7	Q6PEY0	223 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	APTX	Q7Z2E3	356 aa	Known RBP	18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	EFHB	Q8N7U6	833 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	CASP10	Q92851	521 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	TNIP3	Q96KP6	325 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	FAM81B	Q96LP2	452 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	RBSN	Q9H1K0	784 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	RTN4	Q9NQC3	1192 aa	Known RBP	18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	APEX2	Q9UBZ4	518 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	DPP7	Q9UHL4	492 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	PCDHB4	Q9Y5E5	795 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	HCFC2	Q9Y5Z7	792 aa		18.2	■□□□□ 0.5
C11orf49-222	ENST00000534581	COL4A4	P53420	1690 aa	Predicted RBP	18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	WDR27	A2RRH5	827 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	PRRG1	O14668	218 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	LINC01565	O15544	149 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	TPM3	P06753	285 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	KRT5	P13647	590 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	PTPN1	P18031	435 aa	Known RBP	18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	GCNT1	Q02742	428 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	ADCY1	Q08828	1119 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	GPR17	Q13304	367 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	ARHGAP44	Q17R89	818 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	MDH1B	Q5I0G3	518 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	TPGS2	Q68CL5	300 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	RNF19B	Q6ZMZ0	732 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	ENOSF1	Q7L5Y1	443 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	UNC93A	Q86WB7	457 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	SPATA2L	Q8IUW3	424 aa	Predicted RBP	18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	KREMEN2	Q8NCW0	462 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	MAFA	Q8NHW3	353 aa	Predicted RBP	18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	ZNF461	Q8TAF7	563 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	SLC22A17	Q8WUG5	538 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	KAT5	Q92993	513 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	NAP1L5	Q96NT1	182 aa	Predicted RBP	18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	NT5C1A	Q9BXI3	368 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	DPEP3	Q9H4B8	488 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	CYP4F11	Q9HBI6	524 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	PLXNA4	Q9HCM2	1894 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	MAN1C1	Q9NR34	630 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	FAM207A	Q9NSI2	230 aa	Predicted RBP	18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	ABI2	Q9NYB9	513 aa	Predicted RBP	18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	IFNK	Q9P0W0	207 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	DNAJC12	Q9UKB3	198 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	GTF3C4	Q9UKN8	822 aa		18.19	■□□□□ 0.5
C11orf49-222	ENST00000534581	CDH23	Q9H251	3354 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581		A0A1B0GTH6	734 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	MYBPHL	A2RUH7	354 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	TEX33	O43247	280 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	ATP2C2	O75185	946 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	CILP	O75339	1184 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	USP8	P40818	1118 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	KLK7	P49862	253 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	RBM10	P98175	930 aa	Known RBP	18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	CYP27A1	Q02318	531 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	INCA1	Q0VD86	236 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	SMARCB1	Q12824	385 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	RAPGEF1	Q13905	1077 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	MAPRE1	Q15691	268 aa	Known RBP	18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	NFE2	Q16621	373 aa	Predicted RBP	18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	KLHDC7A	Q5VTJ3	777 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	ACOT1	Q86TX2	421 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	LRRTM3	Q86VH5	581 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	GAS2L3	Q86XJ1	694 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	B3GALNT2	Q8NCR0	500 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	NEK11	Q8NG66	645 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	HEXIM2	Q96MH2	286 aa	Known RBP	18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	MED10	Q9BTT4	135 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	HMGXB4	Q9UGU5	601 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	AFF4	Q9UHB7	1163 aa	Known RBP	18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	PCDHB5	Q9Y5E4	795 aa		18.18	■□□□□ 0.5
C11orf49-222	ENST00000534581	SZT2	Q5T011	3432 aa		18.17	■□□□□ 0.5
C11orf49-222	ENST00000534581	SCN1A	P35498	2009 aa		18.17	■□□□□ 0.5
C11orf49-222	ENST00000534581	CBFA2T2	O43439	604 aa		18.17	■□□□□ 0.5
C11orf49-222	ENST00000534581	ABLIM3	O94929	683 aa		18.17	■□□□□ 0.5
C11orf49-222	ENST00000534581	ATF2	P15336	505 aa		18.17	■□□□□ 0.5
C11orf49-222	ENST00000534581	ADAM15	Q13444	863 aa		18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms