RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 NCKAP1LP55160 1127 aa16.18■□□□□ 0.18
CTSB-230ENST00000534149 HMGN5P82970 282 aaKnown RBP16.18■□□□□ 0.18
CTSB-230ENST00000534149 SHC2P98077 582 aa16.18■□□□□ 0.18
CTSB-230ENST00000534149 GRSF1Q12849 480 aaKnown RBP eCLIP16.18■□□□□ 0.18
CTSB-230ENST00000534149 PTPAQ15257 358 aa16.18■□□□□ 0.18
CTSB-230ENST00000534149 TAF12Q16514 161 aa16.18■□□□□ 0.18
CTSB-230ENST00000534149 PLA2G2CQ5R387 149 aa16.18■□□□□ 0.18
CTSB-230ENST00000534149 HYIQ5T013 277 aa16.18■□□□□ 0.18
CTSB-230ENST00000534149 C9orf57Q5W0N0 161 aa16.18■□□□□ 0.18
CTSB-230ENST00000534149 CMTM8Q8IZV2 173 aa16.18■□□□□ 0.18
CTSB-230ENST00000534149 FAM83CQ9BQN1 747 aa16.18■□□□□ 0.18
CTSB-230ENST00000534149 ZCWPW1Q9H0M4 648 aa16.18■□□□□ 0.18
CTSB-230ENST00000534149 EBF3Q9H4W6 596 aa16.18■□□□□ 0.18
CTSB-230ENST00000534149 CCL26Q9Y258 94 aa16.18■□□□□ 0.18
CTSB-230ENST00000534149 OBSL1O75147 1896 aa16.18■□□□□ 0.18
CTSB-230ENST00000534149 H0YCG3 227 aa16.17■□□□□ 0.18
CTSB-230ENST00000534149 ATG13O75143 517 aa16.17■□□□□ 0.18
CTSB-230ENST00000534149 RNF40O75150 1001 aa16.17■□□□□ 0.18
CTSB-230ENST00000534149 EGFP01133 1207 aa16.17■□□□□ 0.18
CTSB-230ENST00000534149 CYP11A1P05108 521 aa16.17■□□□□ 0.18
CTSB-230ENST00000534149 PLA2G4BP0C869 781 aa16.17■□□□□ 0.18
CTSB-230ENST00000534149 NMT1P30419 496 aaKnown RBP16.17■□□□□ 0.18
CTSB-230ENST00000534149 RUNX3Q13761 415 aa16.17■□□□□ 0.18
CTSB-230ENST00000534149 KYAT1Q16773 422 aa16.17■□□□□ 0.18
CTSB-230ENST00000534149 TCEAL6Q6IPX3 200 aa16.17■□□□□ 0.18
CTSB-230ENST00000534149 TCEAL3Q969E4 200 aa16.17■□□□□ 0.18
CTSB-230ENST00000534149 HHIPQ96QV1 700 aa16.17■□□□□ 0.18
CTSB-230ENST00000534149 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.17■□□□□ 0.18
CTSB-230ENST00000534149 LARSQ9P2J5 1176 aaKnown RBP16.17■□□□□ 0.18
CTSB-230ENST00000534149 PCDHGA5Q9Y5G8 931 aa16.17■□□□□ 0.18
CTSB-230ENST00000534149 FAM208BQ5VWN6 2430 aa16.16■□□□□ 0.18
CTSB-230ENST00000534149 TRDMT1O14717 391 aaKnown RBP16.16■□□□□ 0.18
CTSB-230ENST00000534149 AKAP3O75969 853 aa16.16■□□□□ 0.18
CTSB-230ENST00000534149 KCNK5O95279 499 aa16.16■□□□□ 0.18
CTSB-230ENST00000534149 ADRB2P07550 413 aa16.16■□□□□ 0.18
CTSB-230ENST00000534149 ARSAP15289 507 aa16.16■□□□□ 0.18
CTSB-230ENST00000534149 AVPR1AP37288 418 aa16.16■□□□□ 0.18
CTSB-230ENST00000534149 TMEM132DQ14C87 1099 aa16.16■□□□□ 0.18
CTSB-230ENST00000534149 ARSHQ5FYA8 562 aa16.16■□□□□ 0.18
CTSB-230ENST00000534149 NAIF1Q69YI7 327 aaPredicted RBP16.16■□□□□ 0.18
CTSB-230ENST00000534149 TMEM150AQ86TG1 271 aa16.16■□□□□ 0.18
CTSB-230ENST00000534149 MAB21L3Q8N8X9 362 aa16.16■□□□□ 0.18
CTSB-230ENST00000534149 RIN3Q8TB24 985 aa16.16■□□□□ 0.18
CTSB-230ENST00000534149 USP13Q92995 863 aaPredicted RBP16.16■□□□□ 0.18
CTSB-230ENST00000534149 TSPAN18Q96SJ8 248 aa16.16■□□□□ 0.18
CTSB-230ENST00000534149 MSTO1Q9BUK6 570 aa16.16■□□□□ 0.18
CTSB-230ENST00000534149 LSM14BQ9BX40 385 aaKnown RBP16.16■□□□□ 0.18
CTSB-230ENST00000534149 ABI2Q9NYB9 513 aaPredicted RBP16.16■□□□□ 0.18
CTSB-230ENST00000534149 KCND2Q9NZV8 630 aa16.16■□□□□ 0.18
CTSB-230ENST00000534149 TBX20Q9UMR3 447 aa16.16■□□□□ 0.18
CTSB-230ENST00000534149 ANO9A1A5B4 782 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 K7ENM7 598 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 PIRO00625 290 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 PIGRP01833 764 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 HAPLN1P10915 354 aaPredicted RBP16.15■□□□□ 0.18
CTSB-230ENST00000534149 BFSP1Q12934 665 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 PLK5Q496M5 336 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 RNF43Q68DV7 783 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 PSAPL1Q6NUJ1 521 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 SLC39A4Q6P5W5 647 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 LRRTM3Q86VH5 581 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 METTL23Q86XA0 190 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 STKLD1Q8NE28 680 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 SPPL2BQ8TCT7 592 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 CDK5RAP3Q96JB5 506 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 ZC3H10Q96K80 434 aaKnown RBP16.15■□□□□ 0.18
CTSB-230ENST00000534149 REEP2Q9BRK0 252 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 PYM1Q9BRP8 204 aaKnown RBP16.15■□□□□ 0.18
CTSB-230ENST00000534149 FBRSL1Q9HCM7 1045 aaKnown RBP16.15■□□□□ 0.18
CTSB-230ENST00000534149 VPS45Q9NRW7 570 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 CPSF3Q9UKF6 684 aaKnown RBP16.15■□□□□ 0.18
CTSB-230ENST00000534149 DSEQ9UL01 958 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 MYO16Q9Y6X6 1858 aa16.15■□□□□ 0.18
CTSB-230ENST00000534149 A0A0B4J269 797 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 VWA3AA6NCI4 1184 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 CYB561D2O14569 222 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 DCLK1O15075 740 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 HMGA1P17096 107 aaKnown RBP16.14■□□□□ 0.17
CTSB-230ENST00000534149 PAX3P23760 479 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 GPR15P49685 360 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 NLRP12P59046 1061 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 ATP2C1P98194 919 aaPredicted RBP16.14■□□□□ 0.17
CTSB-230ENST00000534149 TMEM119Q4V9L6 283 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 WSCD1Q658N2 575 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 TXNDC8Q6A555 127 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 CD302Q8IX05 232 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 THEM5Q8N1Q8 247 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 CAMKK1Q8N5S9 505 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 C2orf15Q8WU43 125 aaKnown RBP16.14■□□□□ 0.17
CTSB-230ENST00000534149 KCNN1Q92952 543 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 EDEM2Q9BV94 578 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 DUSP15Q9H1R2 295 aaPredicted RBP16.14■□□□□ 0.17
CTSB-230ENST00000534149 TDP1Q9NUW8 608 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 ZMYM5Q9UJ78 669 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 KIAA1549LQ6ZVL6 1849 aa16.14■□□□□ 0.17
CTSB-230ENST00000534149 NUP205Q92621 2012 aa16.13■□□□□ 0.17
CTSB-230ENST00000534149 F11P03951 625 aa16.13■□□□□ 0.17
CTSB-230ENST00000534149 DRD1P21728 446 aa16.13■□□□□ 0.17
CTSB-230ENST00000534149 DDX6P26196 483 aaKnown RBP eCLIP16.13■□□□□ 0.17
CTSB-230ENST00000534149 ACOT2P49753 483 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms