RNA–Protein interactions for RNA: ENST00000534093.5

ROM1-205, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ROM1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-205ENST00000534093 EPHX3Q9H6B9 360 aa13.59□□□□□ -0.23
ROM1-205ENST00000534093 TMLHEQ9NVH6 421 aa13.59□□□□□ -0.23
ROM1-205ENST00000534093 LIMD1Q9UGP4 676 aa13.59□□□□□ -0.23
ROM1-205ENST00000534093 SLC27A5Q9Y2P5 690 aa13.59□□□□□ -0.23
ROM1-205ENST00000534093 YIPF1Q9Y548 306 aa13.59□□□□□ -0.23
ROM1-205ENST00000534093 HCRTO43612 131 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 RHOP08100 348 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 FAM163BP0C2L3 166 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 ALADP13716 330 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 PTPN2P17706 415 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 WARSP23381 471 aaKnown RBP13.58□□□□□ -0.24
ROM1-205ENST00000534093 PCSK1P29120 753 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 GCLMP48507 274 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 TNNC1P63316 161 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 PPP3CAQ08209 521 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 SMARCB1Q12824 385 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 PLD1Q13393 1074 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 ZNF699Q32M78 642 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 PABPC1LQ4VXU2 614 aaKnown RBP13.58□□□□□ -0.24
ROM1-205ENST00000534093 INTS6LQ5JSJ4 861 aaKnown RBP13.58□□□□□ -0.24
ROM1-205ENST00000534093 ELMOD1Q8N336 334 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 SPPL2BQ8TCT7 592 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 C2orf15Q8WU43 125 aaKnown RBP13.58□□□□□ -0.24
ROM1-205ENST00000534093 NELFBQ8WX92 580 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 ZNF512Q96ME7 567 aaPredicted RBP13.58□□□□□ -0.24
ROM1-205ENST00000534093 MRPL45Q9BRJ2 306 aaKnown RBP13.58□□□□□ -0.24
ROM1-205ENST00000534093 CLSTN2Q9H4D0 955 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 VRTNQ9H8Y1 702 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.58□□□□□ -0.24
ROM1-205ENST00000534093 CEP72Q9P209 647 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 HSFX1Q9UBD0 423 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 NXF1Q9UBU9 619 aaKnown RBP13.58□□□□□ -0.24
ROM1-205ENST00000534093 CTNND2Q9UQB3 1225 aa13.58□□□□□ -0.24
ROM1-205ENST00000534093 SLC16A3O15427 465 aaKnown RBP13.57□□□□□ -0.24
ROM1-205ENST00000534093 TACC1O75410 805 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 SOAT2O75908 522 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 CLSTN1O94985 981 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 HLA-DRAP01903 254 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 LMO2P25791 158 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 PIK3CAP42336 1068 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 ALDH1A3P47895 512 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 TUFMP49411 452 aaKnown RBP13.57□□□□□ -0.24
ROM1-205ENST00000534093 NFE2Q16621 373 aaPredicted RBP13.57□□□□□ -0.24
ROM1-205ENST00000534093 SGSM1Q2NKQ1 1148 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 MGAT5BQ3V5L5 792 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 ZNF667Q5HYK9 610 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 IQCEQ6IPM2 695 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 TTI2Q6NXR4 508 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 HS6ST3Q8IZP7 471 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 ITFG1Q8TB96 612 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 ELMO3Q96BJ8 720 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 PKMYT1Q99640 499 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 SEPT5Q99719 369 aaPredicted RBP13.57□□□□□ -0.24
ROM1-205ENST00000534093 DUSP9Q99956 384 aaKnown RBP13.57□□□□□ -0.24
ROM1-205ENST00000534093 CORO1BQ9BR76 489 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 SNX25Q9H3E2 840 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 MMRN2Q9H8L6 949 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 TMEM8AQ9HCN3 771 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 AVENQ9NQS1 362 aaPredicted RBP13.57□□□□□ -0.24
ROM1-205ENST00000534093 ABI2Q9NYB9 513 aaPredicted RBP13.57□□□□□ -0.24
ROM1-205ENST00000534093 EPS15L1Q9UBC2 864 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 GTF3C4Q9UKN8 822 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 CDH9Q9ULB4 789 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 PCDHB5Q9Y5E4 795 aa13.57□□□□□ -0.24
ROM1-205ENST00000534093 BICDL2A1A5D9 508 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 MYBPHLA2RUH7 354 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 ATP2C2O75185 946 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 ASGR2P07307 311 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 PDGFRBP09619 1106 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 HAPLN1P10915 354 aaPredicted RBP13.56□□□□□ -0.24
ROM1-205ENST00000534093 LAMP2P13473 410 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 GTF2H1P32780 548 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 GNL1P36915 607 aaPredicted RBP13.56□□□□□ -0.24
ROM1-205ENST00000534093 EPHB3P54753 998 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 STX17P56962 302 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 PAK1Q13153 545 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 PTPN21Q16825 1174 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 CCDC142Q17RM4 750 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 SLC5A9Q2M3M2 681 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 FAM171BQ6P995 826 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 FOXR2Q6PJQ5 311 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 FILIP1Q7Z7B0 1213 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 OR6B3Q8NGW1 331 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 TAF4BQ92750 862 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 FGF13Q92913 245 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 CEP63Q96MT8 703 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 SYT15Q9BQS2 421 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 PI4K2AQ9BTU6 479 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 NUP62CLQ9H1M0 184 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 DNAJC25Q9H1X3 360 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 SMYD3Q9H7B4 428 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 CDH7Q9ULB5 785 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 MRPS23Q9Y3D9 190 aaKnown RBP13.56□□□□□ -0.24
ROM1-205ENST00000534093 NME7Q9Y5B8 376 aa13.56□□□□□ -0.24
ROM1-205ENST00000534093 GOLGA6L22H0YM25 854 aa13.55□□□□□ -0.24
ROM1-205ENST00000534093 ZNF197O14709 1029 aa13.55□□□□□ -0.24
ROM1-205ENST00000534093 STX10O60499 249 aa13.55□□□□□ -0.24
ROM1-205ENST00000534093 ASS1P00966 412 aaKnown RBP13.55□□□□□ -0.24
ROM1-205ENST00000534093 MYL4P12829 197 aa13.55□□□□□ -0.24
ROM1-205ENST00000534093 P4HA1P13674 534 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms