RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 AFF4Q9UHB7 1163 aaKnown RBP7.11□□□□□ -1.27
CD44-237ENST00000534082 FBXL5Q9UKA1 691 aa7.11□□□□□ -1.27
CD44-237ENST00000534082 PILRBQ9UKJ0 227 aa7.11□□□□□ -1.27
CD44-237ENST00000534082 TPCN1Q9ULQ1 816 aa7.11□□□□□ -1.27
CD44-237ENST00000534082 PPME1Q9Y570 386 aa7.11□□□□□ -1.27
CD44-237ENST00000534082 PCDH15Q96QU1 1955 aa7.11□□□□□ -1.27
CD44-237ENST00000534082 ARID2Q68CP9 1835 aa7.11□□□□□ -1.27
CD44-237ENST00000534082 KIAA1549LQ6ZVL6 1849 aa7.11□□□□□ -1.27
CD44-237ENST00000534082 ATG2BQ96BY7 2078 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 MGAQ8IWI9 3026 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 ESYT2A0FGR8 921 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 TRABD2BA6NFA1 517 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 H7C4K7 107 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 NTRK1P04629 796 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 SERPINF2P08697 491 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 CPB1P15086 417 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 MCM5P33992 734 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 P2RY2P41231 377 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 LIFRP42702 1097 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 QARSP47897 775 aaKnown RBP7.1□□□□□ -1.27
CD44-237ENST00000534082 GALK1P51570 392 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 AMPD2Q01433 879 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 PTH1RQ03431 593 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 PSMD2Q13200 908 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 SLC14A1Q13336 389 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 MXD4Q14582 209 aaPredicted RBP7.1□□□□□ -1.27
CD44-237ENST00000534082 AGERQ15109 404 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 UPP1Q16831 310 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 DUOXA1Q1HG43 343 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 LMBRD2Q68DH5 695 aaPredicted RBP7.1□□□□□ -1.27
CD44-237ENST00000534082 TRIM68Q6AZZ1 485 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 PCSK4Q6UW60 755 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 SLCO6A1Q86UG4 719 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 TTC30AQ86WT1 665 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 FAM181AQ8N9Y4 354 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 CEP76Q8TAP6 659 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 RLN3Q8WXF3 142 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 UROC1Q96N76 676 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 FAM83CQ9BQN1 747 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 SMG9Q9H0W8 520 aaKnown RBP7.1□□□□□ -1.27
CD44-237ENST00000534082 ATXN3LQ9H3M9 355 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 EBF3Q9H4W6 596 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 GOLGA2P5Q9HBQ8 144 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 RBM28Q9NW13 759 aaKnown RBP7.1□□□□□ -1.27
CD44-237ENST00000534082 WRAP73Q9P2S5 460 aaPredicted RBP7.1□□□□□ -1.27
CD44-237ENST00000534082 RCAN3Q9UKA8 241 aa7.1□□□□□ -1.27
CD44-237ENST00000534082 MUC22E2RYF6 1773 aaPredicted RBP7.1□□□□□ -1.27
CD44-237ENST00000534082 ANKRD17O75179 2603 aaKnown RBP7.1□□□□□ -1.27
CD44-237ENST00000534082 NBPF19A0A087WUL8 3843 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 TEX51A0A1B0GUA7 166 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 SYN3O14994 580 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 EDIL3O43854 480 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 DKC1O60832 514 aaKnown RBP eCLIP7.09□□□□□ -1.27
CD44-237ENST00000534082 WISP1O95388 367 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 ARSAP15289 507 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 GABRR2P28476 465 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 CYP4F8P98187 520 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 POU5F1BQ06416 359 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 PLD1Q13393 1074 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 RTN1Q16799 776 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 CTXN3Q4LDR2 81 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 ARHGAP15Q53QZ3 475 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 ZNF280DQ6N043 979 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 GAREM2Q75VX8 874 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 KRT25Q7Z3Z0 450 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 GLRX5Q86SX6 157 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 FRMD1Q8N878 549 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 ASAP3Q8TDY4 903 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 EXOC4Q96A65 974 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 PPP1R10Q96QC0 940 aaKnown RBP7.09□□□□□ -1.27
CD44-237ENST00000534082 NFKBIZQ9BYH8 718 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 LRRC2Q9BYS8 371 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 ZMYND12Q9H0C1 365 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 DNAJC25Q9H1X3 360 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 C6orf50Q9HD87 102 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 XPNPEP1Q9NQW7 623 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 MAFFQ9ULX9 164 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 COL6A6A6NMZ7 2263 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 PTPRBP23467 1997 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 ADAMTS9Q9P2N4 1935 aa7.09□□□□□ -1.27
CD44-237ENST00000534082 COL5A1P20908 1838 aaPredicted RBP7.08□□□□□ -1.28
CD44-237ENST00000534082 EML1O00423 815 aa7.08□□□□□ -1.28
CD44-237ENST00000534082 CAPN5O15484 640 aaPredicted RBP7.08□□□□□ -1.28
CD44-237ENST00000534082 GJB3O75712 270 aa7.08□□□□□ -1.28
CD44-237ENST00000534082 ALDH1A2O94788 518 aa7.08□□□□□ -1.28
CD44-237ENST00000534082 TDP2O95551 362 aa7.08□□□□□ -1.28
CD44-237ENST00000534082 FGF19O95750 216 aa7.08□□□□□ -1.28
CD44-237ENST00000534082 SYPP08247 313 aa7.08□□□□□ -1.28
CD44-237ENST00000534082 SNRPBP14678 240 aaKnown RBP7.08□□□□□ -1.28
CD44-237ENST00000534082 VARSP26640 1264 aaKnown RBP7.08□□□□□ -1.28
CD44-237ENST00000534082 WEE1P30291 646 aa7.08□□□□□ -1.28
CD44-237ENST00000534082 YWHABP31946 246 aaKnown RBP7.08□□□□□ -1.28
CD44-237ENST00000534082 GJA4P35212 333 aa7.08□□□□□ -1.28
CD44-237ENST00000534082 PI4KAP42356 2102 aa7.08□□□□□ -1.28
CD44-237ENST00000534082 EPHB3P54753 998 aa7.08□□□□□ -1.28
CD44-237ENST00000534082 MRPL58Q14197 206 aaKnown RBP7.08□□□□□ -1.28
CD44-237ENST00000534082 ARID5BQ14865 1188 aa7.08□□□□□ -1.28
CD44-237ENST00000534082 PFKFB3Q16875 520 aaPredicted RBP7.08□□□□□ -1.28
CD44-237ENST00000534082 Q4G0T1 1027 aa7.08□□□□□ -1.28
CD44-237ENST00000534082 XKR9Q5GH70 373 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms