RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 CBWD5Q5RIA9 395 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 SDHAF4Q5VUM1 108 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 POTEHQ6S545 545 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 CCDC149Q6ZUS6 474 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 RNF135Q8IUD6 432 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 TRIML1Q8N9V2 468 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 STKLD1Q8NE28 680 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 OR6B3Q8NGW1 331 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 ITFG1Q8TB96 612 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 NECTIN4Q96NY8 510 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 MYADMQ96S97 322 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 MKNK1Q9BUB5 465 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 APOBEC3GQ9HC16 384 aaKnown RBP14.35□□□□□ -0.11
CMTM1-219ENST00000533953 WDR6Q9NNW5 1121 aaKnown RBP14.35□□□□□ -0.11
CMTM1-219ENST00000533953 ABI2Q9NYB9 513 aaPredicted RBP14.35□□□□□ -0.11
CMTM1-219ENST00000533953 LIMD1Q9UGP4 676 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 YIPF1Q9Y548 306 aa14.35□□□□□ -0.11
CMTM1-219ENST00000533953 LRG1P02750 347 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 HNRNPA1P09651 372 aaKnown RBP eCLIP14.34□□□□□ -0.11
CMTM1-219ENST00000533953 GJA1P17302 382 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 WARSP23381 471 aaKnown RBP14.34□□□□□ -0.11
CMTM1-219ENST00000533953 ATICP31939 592 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 GNL1P36915 607 aaPredicted RBP14.34□□□□□ -0.11
CMTM1-219ENST00000533953 ORC1Q13415 861 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 CCDC40Q4G0X9 1142 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 ZNF667Q5HYK9 610 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 GET4Q7L5D6 327 aaPredicted RBP14.34□□□□□ -0.11
CMTM1-219ENST00000533953 FILIP1Q7Z7B0 1213 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 TMEM86AQ8N2M4 240 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 GIPC2Q8TF65 315 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 ING5Q8WYH8 240 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 SYAP1Q96A49 352 aaPredicted RBP14.34□□□□□ -0.11
CMTM1-219ENST00000533953 TCEAL4Q96EI5 215 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 PKMYT1Q99640 499 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 SEPT5Q99719 369 aaPredicted RBP14.34□□□□□ -0.11
CMTM1-219ENST00000533953 ACBD6Q9BR61 282 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 CORO1BQ9BR76 489 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 DNAJC25Q9H1X3 360 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 SNX25Q9H3E2 840 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 DPEP3Q9H4B8 488 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 EPHX3Q9H6B9 360 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 CRTAC1Q9NQ79 661 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 ARMCX3Q9UH62 379 aaPredicted RBP14.34□□□□□ -0.11
CMTM1-219ENST00000533953 MUTYHQ9UIF7 546 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 CLUHO75153 1309 aa14.34□□□□□ -0.11
CMTM1-219ENST00000533953 SLC16A3O15427 465 aaKnown RBP14.33□□□□□ -0.12
CMTM1-219ENST00000533953 XYLBO75191 536 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 PAPLNO95428 1278 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 STAU1O95793 577 aaKnown RBP14.33□□□□□ -0.12
CMTM1-219ENST00000533953 ASS1P00966 412 aaKnown RBP14.33□□□□□ -0.12
CMTM1-219ENST00000533953 ASGR2P07307 311 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 RHOP08100 348 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 FSHRP23945 695 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 CYP2F1P24903 491 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 HOXA9P31269 272 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 GBP2P32456 591 aaPredicted RBP14.33□□□□□ -0.12
CMTM1-219ENST00000533953 PPP1R2P41236 205 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 CCR2P41597 374 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 LHX1P48742 406 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 NLRP12P59046 1061 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 MCCD1P59942 119 aaPredicted RBP14.33□□□□□ -0.12
CMTM1-219ENST00000533953 MYL7Q01449 175 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 TSPY1Q01534 308 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 SLC5A9Q2M3M2 681 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 SGSM1Q2NKQ1 1148 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 MGAT5BQ3V5L5 792 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 INTS6LQ5JSJ4 861 aaKnown RBP14.33□□□□□ -0.12
CMTM1-219ENST00000533953 DPH6Q7L8W6 267 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 CREBRFQ8IUR6 639 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 DCP1BQ8IZD4 617 aaKnown RBP14.33□□□□□ -0.12
CMTM1-219ENST00000533953 RSAD2Q8WXG1 361 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 TATDN2Q93075 761 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 SLC35C1Q96A29 364 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 CEP63Q96MT8 703 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 SYT15Q9BQS2 421 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 OXCT2Q9BYC2 517 aaPredicted RBP14.33□□□□□ -0.12
CMTM1-219ENST00000533953 SMOC2Q9H3U7 446 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 TMEM8AQ9HCN3 771 aa14.33□□□□□ -0.12
CMTM1-219ENST00000533953 C5orf42Q9H799 3197 aa14.32□□□□□ -0.12
CMTM1-219ENST00000533953 CUL9Q8IWT3 2517 aa14.32□□□□□ -0.12
CMTM1-219ENST00000533953 BICDL2A1A5D9 508 aa14.32□□□□□ -0.12
CMTM1-219ENST00000533953 A8MXQ7 604 aa14.32□□□□□ -0.12
CMTM1-219ENST00000533953 MYL4P12829 197 aa14.32□□□□□ -0.12
CMTM1-219ENST00000533953 PTPN2P17706 415 aa14.32□□□□□ -0.12
CMTM1-219ENST00000533953 MXI1P50539 228 aa14.32□□□□□ -0.12
CMTM1-219ENST00000533953 LRMPQ12912 555 aa14.32□□□□□ -0.12
CMTM1-219ENST00000533953 DDR2Q16832 855 aa14.32□□□□□ -0.12
CMTM1-219ENST00000533953 PABPC1LQ4VXU2 614 aaKnown RBP14.32□□□□□ -0.12
CMTM1-219ENST00000533953 HSP90AA4PQ58FG1 418 aa14.32□□□□□ -0.12
CMTM1-219ENST00000533953 MDH1BQ5I0G3 518 aa14.32□□□□□ -0.12
CMTM1-219ENST00000533953 KRT39Q6A163 491 aa14.32□□□□□ -0.12
CMTM1-219ENST00000533953 TDRD5Q8NAT2 981 aaKnown RBP14.32□□□□□ -0.12
CMTM1-219ENST00000533953 MLKLQ8NB16 471 aa14.32□□□□□ -0.12
CMTM1-219ENST00000533953 HMGXB4Q9UGU5 601 aa14.32□□□□□ -0.12
CMTM1-219ENST00000533953 RWDD2AQ9UIY3 292 aa14.32□□□□□ -0.12
CMTM1-219ENST00000533953 PCDHB5Q9Y5E4 795 aa14.32□□□□□ -0.12
CMTM1-219ENST00000533953 CLDN5O00501 218 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 TACC1O75410 805 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 HAPLN1P10915 354 aaPredicted RBP14.31□□□□□ -0.12
CMTM1-219ENST00000533953 PTPN1P18031 435 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms