RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 GPR17Q13304 367 aa15.03■□□□□ -0
CMTM1-218ENST00000533915 RAB33AQ14088 237 aa15.03■□□□□ -0
CMTM1-218ENST00000533915 NR1I3Q14994 352 aa15.03■□□□□ -0
CMTM1-218ENST00000533915 SYCP1Q15431 976 aa15.03■□□□□ -0
CMTM1-218ENST00000533915 DUSP6Q16828 381 aa15.03■□□□□ -0
CMTM1-218ENST00000533915 C4orf50Q6ZRC1 276 aa15.03■□□□□ -0
CMTM1-218ENST00000533915 RTL10Q7L3V2 364 aa15.03■□□□□ -0
CMTM1-218ENST00000533915 RBM23Q86U06 439 aaKnown RBP15.03■□□□□ -0
CMTM1-218ENST00000533915 FMNL3Q8IVF7 1028 aa15.03■□□□□ -0
CMTM1-218ENST00000533915 ZNF461Q8TAF7 563 aa15.03■□□□□ -0
CMTM1-218ENST00000533915 MYLIPQ8WY64 445 aa15.03■□□□□ -0
CMTM1-218ENST00000533915 IQCDQ96DY2 449 aa15.03■□□□□ -0
CMTM1-218ENST00000533915 SYT15Q9BQS2 421 aa15.03■□□□□ -0
CMTM1-218ENST00000533915 MRPL45Q9BRJ2 306 aaKnown RBP15.03■□□□□ -0
CMTM1-218ENST00000533915 RBSNQ9H1K0 784 aa15.03■□□□□ -0
CMTM1-218ENST00000533915 IFNKQ9P0W0 207 aa15.03■□□□□ -0
CMTM1-218ENST00000533915 ATP8B3O60423 1300 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 SPDYE4A6NLX3 237 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 CLASP2O75122 1294 aaKnown RBP15.02■□□□□ -0
CMTM1-218ENST00000533915 PDGFRBP09619 1106 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 RPL17P18621 184 aaKnown RBP15.02■□□□□ -0
CMTM1-218ENST00000533915 RAP1GAPP47736 663 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 NDST1P52848 882 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 ADGRE1Q14246 886 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 TCEAL5Q5H9L2 206 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 INTS6LQ5JSJ4 861 aaKnown RBP15.02■□□□□ -0
CMTM1-218ENST00000533915 LIN9Q5TKA1 542 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 KLHDC7AQ5VTJ3 777 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 PHLDB3Q6NSJ2 640 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 RRAGAQ7L523 313 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 MICALL1Q8N3F8 863 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 HDAC7Q8WUI4 952 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 CASP10Q92851 521 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 NUP58Q9BVL2 599 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 ZCWPW1Q9H0M4 648 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 PLEKHA4Q9H4M7 779 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 FAM207AQ9NSI2 230 aaPredicted RBP15.02■□□□□ -0
CMTM1-218ENST00000533915 AFF4Q9UHB7 1163 aaKnown RBP15.02■□□□□ -0
CMTM1-218ENST00000533915 KIAA1257Q9ULG3 409 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 PCDHB4Q9Y5E5 795 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 PCDHGC5Q9Y5F6 944 aa15.02■□□□□ -0
CMTM1-218ENST00000533915 TSC2P49815 1807 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 LRRN2O75325 713 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 CILPO75339 1184 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 UCHL3P15374 230 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 PTPN1P18031 435 aaKnown RBP15.01□□□□□ -0.01
CMTM1-218ENST00000533915 ROR1Q01973 937 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 KCNMA1Q12791 1236 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 SLC39A12Q504Y0 691 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 SARM1Q6SZW1 724 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 CCDC149Q6ZUS6 474 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 OSTM1Q86WC4 334 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 GAS2L3Q86XJ1 694 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 PALB2Q86YC2 1186 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 GLYCTKQ8IVS8 523 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 ARHGEF19Q8IW93 802 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 EFHBQ8N7U6 833 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 B3GALNT2Q8NCR0 500 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 SPPL2BQ8TCT7 592 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 ELMO3Q96BJ8 720 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 NAP1L5Q96NT1 182 aaPredicted RBP15.01□□□□□ -0.01
CMTM1-218ENST00000533915 GUCD1Q96NT3 240 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 TRIM5Q9C035 493 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 SDCBP2Q9H190 292 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 IGFLR1Q9H665 355 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 DZANK1Q9NVP4 752 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 HSFX1Q9UBD0 423 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 DNAJC12Q9UKB3 198 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 SIK3Q9Y2K2 1263 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 PCDHB5Q9Y5E4 795 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 CDH23Q9H251 3354 aa15.01□□□□□ -0.01
CMTM1-218ENST00000533915 SZT2Q5T011 3432 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 PRRG1O14668 218 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 PER2O15055 1255 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 TEX33O43247 280 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 TGM5O43548 720 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 ABLIM3O94929 683 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 KRT5P13647 590 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 ATF2P15336 505 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 ACAT1P24752 427 aaKnown RBP15□□□□□ -0.01
CMTM1-218ENST00000533915 LMO2P25791 158 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 CLCN4P51793 760 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 BPIFB4P59827 614 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 RAPGEF1Q13905 1077 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 ARHGAP44Q17R89 818 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 TMEM270Q6UE05 265 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 CACNA2D4Q7Z3S7 1137 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 ADGRD2Q7Z7M1 963 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 SPATA2LQ8IUW3 424 aaPredicted RBP15□□□□□ -0.01
CMTM1-218ENST00000533915 CRYBG2Q8N1P7 616 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 OR10T2Q8NGX3 314 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 MYCBPAPQ8TBZ2 947 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 TMEM176AQ96HP8 235 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 FUBP3Q96I24 572 aaKnown RBP eCLIP15□□□□□ -0.01
CMTM1-218ENST00000533915 HEXIM2Q96MH2 286 aaKnown RBP15□□□□□ -0.01
CMTM1-218ENST00000533915 SPAG5Q96R06 1193 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 ARID3AQ99856 593 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 RTP3Q9BQQ7 232 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 STK33Q9BYT3 514 aa15□□□□□ -0.01
CMTM1-218ENST00000533915 XPO4Q9C0E2 1151 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms