RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 KHSRPQ92945 711 aaKnown RBP eCLIP14.34□□□□□ -0.11
CAPN1-227ENST00000533909 RTP3Q9BQQ7 232 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 ACBD6Q9BR61 282 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 MKNK1Q9BUB5 465 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 EPHX3Q9H6B9 360 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 PCDHB5Q9Y5E4 795 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 ZFP37Q9Y6Q3 630 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-227ENST00000533909 BICDL2A1A5D9 508 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 SLC16A3O15427 465 aaKnown RBP14.33□□□□□ -0.12
CAPN1-227ENST00000533909 RHOP08100 348 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 TRIM49P0CI25 452 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 TRIM49CP0CI26 452 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 MYL4P12829 197 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 TRIM21P19474 475 aaKnown RBP14.33□□□□□ -0.12
CAPN1-227ENST00000533909 CCNE1P24864 410 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 GNL1P36915 607 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-227ENST00000533909 GCLMP48507 274 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 MORC3Q14149 939 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 SGSM1Q2NKQ1 1148 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 DCAF17Q5H9S7 520 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-227ENST00000533909 TCERG1LQ5VWI1 586 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 ANKRD40Q6AI12 368 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 SCARA3Q6AZY7 606 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 SPATA2LQ8IUW3 424 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-227ENST00000533909 TRIML1Q8N9V2 468 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 LEMD2Q8NC56 503 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 OR6B3Q8NGW1 331 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 ING5Q8WYH8 240 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 TAF4BQ92750 862 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 MYADMQ96S97 322 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 GZF1Q9H116 711 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-227ENST00000533909 DNMT3BQ9UBC3 853 aaKnown RBP14.33□□□□□ -0.12
CAPN1-227ENST00000533909 HSFX1Q9UBD0 423 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 CDH7Q9ULB5 785 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 SORCS3Q9UPU3 1222 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 TSC2P49815 1807 aa14.33□□□□□ -0.12
CAPN1-227ENST00000533909 STAU1O95793 577 aaKnown RBP14.32□□□□□ -0.12
CAPN1-227ENST00000533909 C4BPAP04003 597 aaKnown RBP14.32□□□□□ -0.12
CAPN1-227ENST00000533909 ASGR2P07307 311 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 PDGFRBP09619 1106 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 LAMP2P13473 410 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 WARSP23381 471 aaKnown RBP14.32□□□□□ -0.12
CAPN1-227ENST00000533909 ENPEPQ07075 957 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 MAPRE1Q15691 268 aaKnown RBP14.32□□□□□ -0.12
CAPN1-227ENST00000533909 ZACNQ401N2 412 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 CCDC40Q4G0X9 1142 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 INTS6LQ5JSJ4 861 aaKnown RBP14.32□□□□□ -0.12
CAPN1-227ENST00000533909 TMEM31Q5JXX7 168 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 SCARA5Q6ZMJ2 495 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 C4orf50Q6ZRC1 276 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 SV2AQ7L0J3 742 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 NELFBQ8WX92 580 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 SYT15Q9BQS2 421 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 KIAA1468Q9P260 1216 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 IGSF9Q9P2J2 1179 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 EPS15L1Q9UBC2 864 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 ARMCX3Q9UH62 379 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-227ENST00000533909 CDH9Q9ULB4 789 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 CTNND2Q9UQB3 1225 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 ASB3Q9Y575 518 aa14.32□□□□□ -0.12
CAPN1-227ENST00000533909 DENND4AQ7Z401 1863 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 MUC3AQ02505 3323 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 TRIM49BA6NDI0 452 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 A8MXQ7 604 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 TACC1O75410 805 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 SOAT2O75908 522 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 FGF19O95750 216 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 HLA-DRAP01903 254 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 GTF2H1P32780 548 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 PSMC1P62191 440 aaKnown RBP14.31□□□□□ -0.12
CAPN1-227ENST00000533909 RPL10AP62906 217 aaKnown RBP14.31□□□□□ -0.12
CAPN1-227ENST00000533909 ZXDAP98168 799 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 PAK1Q13153 545 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 KRT39Q6A163 491 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 CLEC17AQ6ZS10 378 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 MTSS1LQ765P7 747 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 LRRTM3Q86VH5 581 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 OSTM1Q86WC4 334 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 UBALD2Q8IYN6 164 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 ITFG1Q8TB96 612 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 KBTBD7Q8WVZ9 684 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 EDAQ92838 391 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 FGF13Q92913 245 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 GCNAQ96QF7 691 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 MRPL45Q9BRJ2 306 aaKnown RBP14.31□□□□□ -0.12
CAPN1-227ENST00000533909 PI4K2AQ9BTU6 479 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 DNAI2Q9GZS0 605 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 NUP62CLQ9H1M0 184 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 CRISPLD1Q9H336 500 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 CLSTN2Q9H4D0 955 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 SLITRK6Q9H5Y7 841 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 KCNK12Q9HB15 430 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 TMEM8AQ9HCN3 771 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.31□□□□□ -0.122e-14■■■■■ 49.7
CAPN1-227ENST00000533909 GDE1Q9NZC3 331 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 CEP72Q9P209 647 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 GTF3C4Q9UKN8 822 aa14.31□□□□□ -0.12
CAPN1-227ENST00000533909 FAM86C2PA6NEL3 165 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 GABRDO14764 452 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 N4BP1O75113 896 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms