RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 ZC3H14Q6PJT7 736 aaKnown RBP11.09□□□□□ -0.63
CLP1-206ENST00000533905 APBB1IPQ7Z5R6 666 aaPredicted RBP11.09□□□□□ -0.63
CLP1-206ENST00000533905 SFTPA1Q8IWL2 248 aa11.09□□□□□ -0.63
CLP1-206ENST00000533905 C1orf127Q8N9H9 656 aa11.09□□□□□ -0.63
CLP1-206ENST00000533905 DEPDC1BQ8WUY9 529 aa11.09□□□□□ -0.63
CLP1-206ENST00000533905 LARP4BQ92615 738 aaKnown RBP11.09□□□□□ -0.63
CLP1-206ENST00000533905 ELMO3Q96BJ8 720 aa11.09□□□□□ -0.63
CLP1-206ENST00000533905 CDK5RAP3Q96JB5 506 aa11.09□□□□□ -0.63
CLP1-206ENST00000533905 PYM1Q9BRP8 204 aaKnown RBP11.09□□□□□ -0.63
CLP1-206ENST00000533905 CBWD1Q9BRT8 395 aa11.09□□□□□ -0.63
CLP1-206ENST00000533905 ATXN3LQ9H3M9 355 aa11.09□□□□□ -0.63
CLP1-206ENST00000533905 SEMA4AQ9H3S1 761 aa11.09□□□□□ -0.63
CLP1-206ENST00000533905 ABI2Q9NYB9 513 aaPredicted RBP11.09□□□□□ -0.63
CLP1-206ENST00000533905 LARSQ9P2J5 1176 aaKnown RBP11.09□□□□□ -0.63
CLP1-206ENST00000533905 SIX4Q9UIU6 781 aa11.09□□□□□ -0.63
CLP1-206ENST00000533905 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.09□□□□□ -0.63
CLP1-206ENST00000533905 STYXL1Q9Y6J8 313 aa11.09□□□□□ -0.63
CLP1-206ENST00000533905 H3BQV1 296 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 CYB561D2O14569 222 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 ODC1P11926 461 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 HOXD13P35453 343 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 ZXDBP98169 803 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 MESP2Q0VG99 397 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 MYBPC2Q14324 1141 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 MGAT5BQ3V5L5 792 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 TXNDC8Q6A555 127 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 ADALQ6DHV7 355 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 FSTL4Q6MZW2 842 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 PRR23BQ6ZRT6 265 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 ATRIPQ8WXE1 791 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 IRF7Q92985 503 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 USP13Q92995 863 aaPredicted RBP11.08□□□□□ -0.64
CLP1-206ENST00000533905 PI4K2AQ9BTU6 479 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 PANK2Q9BZ23 570 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 TRPV5Q9NQA5 729 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 TMEM30AQ9NV96 361 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 USP18Q9UMW8 372 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 STK24Q9Y6E0 443 aa11.08□□□□□ -0.64
CLP1-206ENST00000533905 SMG1Q96Q15 3661 aaKnown RBP11.08□□□□□ -0.64
CLP1-206ENST00000533905 CELSR3Q9NYQ7 3312 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 VPS37CA5D8V6 355 aaPredicted RBP11.07□□□□□ -0.64
CLP1-206ENST00000533905 SCAMP3O14828 347 aaKnown RBP11.07□□□□□ -0.64
CLP1-206ENST00000533905 CHADO15335 359 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 ATP2C2O75185 946 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 F11P03951 625 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 HAPLN1P10915 354 aaPredicted RBP11.07□□□□□ -0.64
CLP1-206ENST00000533905 CASP1P29466 404 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 POLR2BP30876 1174 aaKnown RBP11.07□□□□□ -0.64
CLP1-206ENST00000533905 UBA7P41226 1012 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 EPHB3P54753 998 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 PUM1Q14671 1186 aaKnown RBP eCLIP11.07□□□□□ -0.64
CLP1-206ENST00000533905 SF3A2Q15428 464 aaKnown RBP11.07□□□□□ -0.64
CLP1-206ENST00000533905 DDR2Q16832 855 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 LARP1BQ659C4 914 aaKnown RBP11.07□□□□□ -0.64
CLP1-206ENST00000533905 CLEC17AQ6ZS10 378 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 ZNF720Q7Z2F6 126 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 USP37Q86T82 979 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 ELMOD1Q8N336 334 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 PDCL2Q8N4E4 241 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 OR5B17Q8NGF7 314 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 FAM213AQ9BRX8 229 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 GZF1Q9H116 711 aaPredicted RBP11.07□□□□□ -0.64
CLP1-206ENST00000533905 PCIF1Q9H4Z3 704 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 DPP3Q9NY33 737 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 KCND2Q9NZV8 630 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 AGO2Q9UKV8 859 aaKnown RBP11.07□□□□□ -0.64
CLP1-206ENST00000533905 SMC3Q9UQE7 1217 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 LOC400499M0QZD8 3231 aa11.07□□□□□ -0.64
CLP1-206ENST00000533905 CEP295Q9C0D2 2601 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 TULP1O00294 542 aaPredicted RBP11.06□□□□□ -0.64
CLP1-206ENST00000533905 MAN2B1O00754 1011 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 EGFP01133 1207 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 ITGB3P05106 788 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 KRT18P05783 430 aaKnown RBP11.06□□□□□ -0.64
CLP1-206ENST00000533905 CYP2F1P24903 491 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 LONP1P36776 959 aaKnown RBP11.06□□□□□ -0.64
CLP1-206ENST00000533905 MAGEA9P43362 315 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 ALDH1A3P47895 512 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 KPNA1P52294 538 aaPredicted RBP11.06□□□□□ -0.64
CLP1-206ENST00000533905 CACNA2D1P54289 1103 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 NLRP12P59046 1061 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 FOXK2Q01167 660 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 TCEAL6Q6IPX3 200 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 MAB21L3Q8N8X9 362 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 TCEAL3Q969E4 200 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 AK8Q96MA6 479 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 GBP4Q96PP9 640 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 USP28Q96RU2 1077 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 CYP2S1Q96SQ9 504 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 FAM83CQ9BQN1 747 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 ST6GALNAC4Q9H4F1 302 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 EBF3Q9H4W6 596 aa11.06□□□□□ -0.64
CLP1-206ENST00000533905 C2orf78A6NCI8 922 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 ACACBO00763 2458 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 DCLK1O15075 740 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 TBCAO75347 108 aaKnown RBP11.05□□□□□ -0.64
CLP1-206ENST00000533905 PRPF6O94906 941 aaKnown RBP11.05□□□□□ -0.64
CLP1-206ENST00000533905 LMO2P25791 158 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 CXCL12P48061 93 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 TAF6P49848 677 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms