RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 UBA3Q8TBC4 463 aa12.65□□□□□ -0.38
CLP1-205ENST00000533682 CPXM1Q96SM3 734 aa12.65□□□□□ -0.38
CLP1-205ENST00000533682 NXF3Q9H4D5 531 aaKnown RBP12.65□□□□□ -0.38
CLP1-205ENST00000533682 ASB7Q9H672 318 aa12.65□□□□□ -0.38
CLP1-205ENST00000533682 ZDHHC18Q9NUE0 388 aa12.65□□□□□ -0.38
CLP1-205ENST00000533682 PCYOX1Q9UHG3 505 aa12.65□□□□□ -0.38
CLP1-205ENST00000533682 KRT10P13645 584 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 RFC1P35251 1148 aaPredicted RBP12.64□□□□□ -0.39
CLP1-205ENST00000533682 ACTN2P35609 894 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 SLC1A1P43005 524 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 DHX9Q08211 1270 aaKnown RBP12.64□□□□□ -0.39
CLP1-205ENST00000533682 TRIP13Q15645 432 aaPredicted RBP12.64□□□□□ -0.39
CLP1-205ENST00000533682 SGO2Q562F6 1265 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 DNAJC24Q6P3W2 148 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 DCUN1D2Q6PH85 259 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 ZDHHC24Q6UX98 284 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 PRUNE1Q86TP1 453 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 IFNL1Q8IU54 200 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 MREGQ8N565 214 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 EMC1Q8N766 993 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 USP6NLQ92738 828 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 LPIN3Q9BQK8 851 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 ADPGKQ9BRR6 497 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 SLC5A4Q9NY91 659 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 GRHL1Q9NZI5 618 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 KLK14Q9P0G3 267 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 TUBGCP4Q9UGJ1 667 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 GOLGA6CA6NDK9 693 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 MYADML2A6NDP7 307 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 HCRTO43612 131 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 CILPO75339 1184 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 IVLP07476 585 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 GOLGA6DP0CG33 693 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 EIF4BP23588 611 aaKnown RBP12.64□□□□□ -0.39
CLP1-205ENST00000533682 PSMC4P43686 418 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 CYP1B1Q16678 543 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 TTC19Q6DKK2 380 aaPredicted RBP12.64□□□□□ -0.39
CLP1-205ENST00000533682 TMC3Q7Z5M5 1100 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 ZNF410Q86VK4 478 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 PACS2Q86VP3 889 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 JOSD2Q8TAC2 188 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 UBLCP1Q8WVY7 318 aaPredicted RBP12.64□□□□□ -0.39
CLP1-205ENST00000533682 HEXIM2Q96MH2 286 aaKnown RBP12.64□□□□□ -0.39
CLP1-205ENST00000533682 RUFY1Q96T51 708 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 ARHGAP39Q9C0H5 1083 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 RNF39Q9H2S5 420 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 GOLGA6AQ9NYA3 693 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 MTUS1Q9ULD2 1270 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 PCDHGC3Q9UN70 934 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 ATP8A1Q9Y2Q0 1164 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 SCINQ9Y6U3 715 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 NRCAMQ92823 1304 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 TRPM7Q96QT4 1865 aa12.64□□□□□ -0.39
CLP1-205ENST00000533682 RRN3P2A6NIE6 340 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 LSM8O95777 96 aaKnown RBP12.63□□□□□ -0.39
CLP1-205ENST00000533682 CYP3A5P20815 502 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 NDST1P52848 882 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 PTPN11Q06124 597 aaPredicted RBP12.63□□□□□ -0.39
CLP1-205ENST00000533682 CRHR2Q13324 411 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 DHX34Q14147 1143 aaKnown RBP12.63□□□□□ -0.39
CLP1-205ENST00000533682 PPP1R15BQ5SWA1 713 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 ZFYVE27Q5T4F4 411 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 KAZNQ674X7 775 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.63□□□□□ -0.39
CLP1-205ENST00000533682 TMEM176AQ96HP8 235 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 FMO2Q99518 471 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 GCOM2Q9BZD3 368 aaPredicted RBP12.63□□□□□ -0.39
CLP1-205ENST00000533682 RAB17Q9H0T7 212 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 FAM114A2Q9NRY5 505 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 MBLAC1A4D2B0 266 aaPredicted RBP12.63□□□□□ -0.39
CLP1-205ENST00000533682 H0YGN5 161 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 ERBB2P04626 1255 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 CDH5P33151 784 aaPredicted RBP12.63□□□□□ -0.39
CLP1-205ENST00000533682 GRM5P41594 1212 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 PSEN2P49810 448 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 ADAM17P78536 824 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 SKIDA1Q1XH10 827 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 RGMBQ6NW40 437 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 RHOT1Q8IXI2 618 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 ARFGAP1Q8N6T3 406 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 GPATCH11Q8N954 259 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 CENPHQ9H3R5 247 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.63□□□□□ -0.39
CLP1-205ENST00000533682 CEP83Q9Y592 693 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 NME7Q9Y5B8 376 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 NFS1Q9Y697 457 aa12.63□□□□□ -0.39
CLP1-205ENST00000533682 FAM187AA6NFU0 413 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 MANSC4A6NHS7 340 aaPredicted RBP12.62□□□□□ -0.39
CLP1-205ENST00000533682 TP73O15350 636 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 MICAL2O94851 1124 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 CALB1P05937 261 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 DARSP14868 501 aaKnown RBP12.62□□□□□ -0.39
CLP1-205ENST00000533682 HSPA6P17066 643 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 KLF1Q13351 362 aaPredicted RBP12.62□□□□□ -0.39
CLP1-205ENST00000533682 KCNT1Q5JUK3 1230 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 CEP85LQ5SZL2 805 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 SLC27A1Q6PCB7 646 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 EIF1ADQ8N9N8 165 aaKnown RBP12.62□□□□□ -0.39
CLP1-205ENST00000533682 TRPV1Q8NER1 839 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms