RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 SRGAP1Q7Z6B7 1085 aa3.43□□□□□ -1.86
ATM-220ENST00000533526 SLC44A3Q8N4M1 653 aa3.43□□□□□ -1.86
ATM-220ENST00000533526 ZBTB34Q8NCN2 500 aa3.43□□□□□ -1.86
ATM-220ENST00000533526 PSD4Q8NDX1 1056 aa3.43□□□□□ -1.86
ATM-220ENST00000533526 PLBD2Q8NHP8 589 aa3.43□□□□□ -1.86
ATM-220ENST00000533526 SSH3Q8TE77 659 aa3.43□□□□□ -1.86
ATM-220ENST00000533526 KBTBD7Q8WVZ9 684 aa3.43□□□□□ -1.86
ATM-220ENST00000533526 SUCLG2Q96I99 432 aa3.43□□□□□ -1.86
ATM-220ENST00000533526 LRFN3Q9BTN0 628 aa3.43□□□□□ -1.86
ATM-220ENST00000533526 CPA4Q9UI42 421 aa3.43□□□□□ -1.86
ATM-220ENST00000533526 AGAP1Q9UPQ3 857 aa3.43□□□□□ -1.86
ATM-220ENST00000533526 PAXBP1Q9Y5B6 917 aa3.43□□□□□ -1.86
ATM-220ENST00000533526 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 CAPN8A6NHC0 703 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 VPS4BO75351 444 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 LMNAP02545 664 aaKnown RBP3.42□□□□□ -1.86
ATM-220ENST00000533526 ATXN1LP0C7T5 689 aaKnown RBP3.42□□□□□ -1.86
ATM-220ENST00000533526 PIM1P11309 404 aaPredicted RBP3.42□□□□□ -1.86
ATM-220ENST00000533526 CXCR5P32302 372 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 VIPR2P41587 438 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 GCLCP48506 637 aaPredicted RBP3.42□□□□□ -1.86
ATM-220ENST00000533526 INHBEP58166 350 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 MRPS35P82673 323 aaKnown RBP3.42□□□□□ -1.86
ATM-220ENST00000533526 ZNF169Q14929 603 aaPredicted RBP3.42□□□□□ -1.86
ATM-220ENST00000533526 IQCB1Q15051 598 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 SMN1Q16637 294 aaKnown RBP3.42□□□□□ -1.86
ATM-220ENST00000533526 LONRF3Q496Y0 759 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 KAZNQ674X7 775 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 LMBRD2Q68DH5 695 aaPredicted RBP3.42□□□□□ -1.86
ATM-220ENST00000533526 TAF2Q6P1X5 1199 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 LAYNQ6UX15 382 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 OVCH2Q7RTZ1 564 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 KIAA0319LQ8IZA0 1049 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 PCSK9Q8NBP7 692 aaKnown RBP3.42□□□□□ -1.86
ATM-220ENST00000533526 B3GALNT2Q8NCR0 500 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 FAM46DQ8NEK8 389 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 GPR150Q8NGU9 434 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 OR6B3Q8NGW1 331 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 SLC30A5Q8TAD4 765 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 PPP1R35Q8TAP8 253 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 ZG16BQ96DA0 208 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 PDLIM2Q96JY6 352 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 MRGPRX1Q96LB2 322 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 AGAP2Q99490 1192 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 B3GNT5Q9BYG0 378 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 KRTAP4-5Q9BYR2 181 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 AMBRA1Q9C0C7 1298 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 PRDM11Q9NQV5 511 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 C11orf21Q9P2W6 132 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 ZNHIT2Q9UHR6 403 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 L1RE1Q9UN81 338 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 TMX2Q9Y320 296 aa3.42□□□□□ -1.86
ATM-220ENST00000533526 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.42□□□□□ -1.86
ATM-220ENST00000533526 ISM1B1AKI9 464 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 PRPF3O43395 683 aaKnown RBP3.41□□□□□ -1.86
ATM-220ENST00000533526 FRS3O43559 492 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 TBC1D4O60343 1298 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 DNAJB5O75953 348 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 HRGP04196 525 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 GRPP07492 148 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 CD6P30203 668 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 RARRES1P49788 294 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 ARFIP2P53365 341 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 WNT3P56703 355 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 MC2RQ01718 297 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 GBX1Q14549 363 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 SLC44A4Q53GD3 710 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 PRR16Q569H4 304 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 STRIP1Q5VSL9 837 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 ICE2Q659A1 982 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 DARS2Q6PI48 645 aaKnown RBP3.41□□□□□ -1.86
ATM-220ENST00000533526 ZNF783Q6ZMS7 281 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 GRASPQ7Z6J2 395 aaPredicted RBP3.41□□□□□ -1.86
ATM-220ENST00000533526 TOR1AIP2Q8NFQ8 470 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 TTC8Q8TAM2 541 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 FAM136AQ96C01 138 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 FBXL20Q96IG2 436 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 ALG8Q9BVK2 526 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 SPATA5L1Q9BVQ7 753 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 TPSD1Q9BZJ3 242 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 RIOX1Q9H6W3 641 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 KLC4Q9NSK0 619 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 ZSCAN32Q9NX65 697 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.41□□□□□ -1.86
ATM-220ENST00000533526 XPR1Q9UBH6 696 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 HESX1Q9UBX0 185 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 TPCN1Q9ULQ1 816 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 SHOC2Q9UQ13 582 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 INSL6Q9Y581 213 aa3.41□□□□□ -1.86
ATM-220ENST00000533526 CFAP69A5D8W1 941 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 ZAR1LA6NP61 321 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 BTN3A1O00481 513 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 UNC5CO95185 931 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 ZBED1O96006 694 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 PPP3CBP16298 524 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 RPL17P18621 184 aaKnown RBP3.4□□□□□ -1.87
ATM-220ENST00000533526 BMP5P22003 454 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 LRPAP1P30533 357 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 GRIA3P42263 894 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 PXNP49023 591 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms